OB06G30440 (Oryza brachyantha)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OB06G30440 T275332_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.686 0.745
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.670 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB06G30440.1 Myb 201 251

Links

Other Myb/SANT family TFs
Other Oryza brachyantha TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC06G20510 Oryza punctata OPUNC06G20510 N 0.809
BGIOSGA023368 Oryza indica BGIOSGA023368 N 0.775
OBART06G22800 Oryza barthii OBART06G22800 N 0.775
OGLUM06G24020 Oryza glumaepatula OGLUM06G24020 N 0.775
OLONG_015129 Oryza longistaminata OLONG_015129 N 0.775
OMERI06G22730 Oryza meridionalis OMERI06G22730 N 0.775
ONIVA06G26720 Oryza nivara ONIVA06G26720 N 0.775
ORGLA06G0190300 Oryza glaberrima ORGLA06G0190300 N 0.775
ORUFI06G24440 Oryza rufipogon ORUFI06G24440 N 0.775
OS06G0647200 Oryza sativa OS06G0647200 N 0.775
PDK_20s1887621g001 Phoenix dactylifera PDK_20s1887621g001 I 0.725
SELMODRAFT_444702 Selaginella moellendorffii SELMODRAFT_444702 I 0.707
SELMODRAFT_447635 Selaginella moellendorffii SELMODRAFT_447635 I 0.707
29848.m004559 Ricinus communis 29848.m004559 I 0.704
MTR_1g013170 Medicago truncatula MTR_1g013170 I 0.698
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.697
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.697
Bo1g055180 Brassica oleracea Bo1g055180 I 0.686
Bra033527 Brassica rapa Bra033527 I 0.686
GSMUA_Achr9G16610_001 Musa acuminata GSMUA_Achr9G16610_001 I 0.686
ARR2 Arabidopsis lyrata scaffold_702902.1 I 0.686
Bostr.30275s0051 Boechera stricta Bostr.30275s0051 I 0.686
Cagra.0053s0018 Capsella grandiflora Cagra.0053s0018 I 0.686
Carubv10007581m.g Capsella rubella Carubv10007581m.g I 0.686
gene10041-v1.0-hybrid Fragaria vesca gene10041-v1.0-hybrid I 0.686
Lus10016846.g Linum usitatissimum Lus10016846.g I 0.686
Lus10037719.g Linum usitatissimum Lus10037719.g I 0.686
Thhalv10024686m.g Eutrema salsugineum Thhalv10024686m.g I 0.686
estExt_Genewise1.C_90203 Chlorella NC64A estExt_Genewise1.C_90203 I 0.681
Bostr.0556s0001 Boechera stricta Bostr.0556s0001 I 0.676
gw1.15.242.1 Coccomyxa subellipsoidea C169 gw1.15.242.1 I 0.671
fgeneshCV_pg.C_scaffold_15000185 Chlorella vulgaris fgeneshCV_pg.C_scaffold_15000185 I 0.671
ARR1 Arabidopsis thaliana AT3G16857 D 0.670
Bo3g068550 Brassica oleracea Bo3g068550 I 0.670
Bo5g123620 Brassica oleracea Bo5g123620 I 0.670
Bra001643 Brassica rapa Bra001643 I 0.670
Bra022183 Brassica rapa Bra022183 I 0.670
Bostr.28625s0008 Boechera stricta Bostr.28625s0008 I 0.670
Cagra.5497s0018 Capsella grandiflora Cagra.5497s0018 I 0.670
Carubv10013107m.g Capsella rubella Carubv10013107m.g I 0.670
gw1.31.134.1 Physcomitrella patens gw1.31.134.1 I 0.665