OB12G14410 (Oryza brachyantha)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OB12G14410 T275406_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.723 0.774
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.723 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB12G14410.1 Myb 156 202
OB12G14410.1 Myb 208 253

Links

Other Myb/SANT family TFs
Other Oryza brachyantha TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OLONG_008158 Oryza longistaminata OLONG_008158 I 0.867
OMERI12G02760 Oryza meridionalis OMERI12G02760 I 0.867
ONIVA12G04220 Oryza nivara ONIVA12G04220 I 0.867
OGLUM12G05330 Oryza glumaepatula OGLUM12G05330 I 0.867
OBART12G04480 Oryza barthii OBART12G04480 I 0.867
OBART12G04500 Oryza barthii OBART12G04500 I 0.867
BGIOSGA036541 Oryza indica BGIOSGA036541 I 0.867
ORGLA12G0042300 Oryza glaberrima ORGLA12G0042300 I 0.867
OPUNC12G04510 Oryza punctata OPUNC12G04510 I 0.858
ORUFI12G05180 Oryza rufipogon ORUFI12G05180 I 0.858
LPERR12G04190 Leersia perrieri LPERR12G04190 I 0.848
F775_22212 Aegilops tauschii F775_22212 I 0.817
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I 0.817
TRIUR3_12421 Triticum urartu TRIUR3_12421 I 0.817
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I 0.817
OB06G13860 Oryza brachyantha OB06G13860 I 0.799
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I 0.794
OLONG_010000 Oryza longistaminata OLONG_010000 I 0.790
OMERI06G04840 Oryza meridionalis OMERI06G04840 I 0.790
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I 0.790
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I 0.790
OPUNC06G03990 Oryza punctata OPUNC06G03990 I 0.790
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I 0.790
ONIVA06G05390 Oryza nivara ONIVA06G05390 I 0.790
OS06G0162700 Oryza sativa OS06G0162700 I 0.790
OBART06G04170 Oryza barthii OBART06G04170 I 0.790
BGIOSGA022369 Oryza indica BGIOSGA022369 I 0.790
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I 0.787
Traes_7DS_E27ECBC6E Triticum aestivum Traes_7DS_E27ECBC6E I 0.786
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.784
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.784
LPERR06G03780 Leersia perrieri LPERR06G03780 I 0.782
Pavir.J25000 Panicum virgatum Pavir.J25000 I 0.768
Sb01g005100 Sorghum bicolor Sb01g005100 I 0.758
Pavir.J37434 Panicum virgatum Pavir.J37434 I 0.755
GRMZM5G870592 Zea mays GRMZM5G870592 I 0.752
cassava33974.m1 Manihot esculenta cassava33974.m1 I 0.747
GRMZM2G302549 Zea mays GRMZM2G302549 I 0.743
Si039046m.g Setaria italica Si039046m.g I 0.743
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.738
Lus10042111.g Linum usitatissimum Lus10042111.g I 0.728
Thhalv10026824m.g Eutrema salsugineum Thhalv10026824m.g I 0.726
Bo3g157300 Brassica oleracea Bo3g157300 I 0.726
Bo1g019910 Brassica oleracea Bo1g019910 I 0.723
Carubv10006734m.g Capsella rubella Carubv10006734m.g I 0.723
Cagra.4306s0015 Capsella grandiflora Cagra.4306s0015 I 0.723
MYB98 Arabidopsis lyrata scaffold_702543.1 I 0.723
Bostr.30275s0352 Boechera stricta Bostr.30275s0352 I 0.723
Bra013346 Brassica rapa Bra013346 I 0.723
MYB98 Arabidopsis thaliana AT4G18770 D 0.723
Cla019490 Citrullus lanatus Cla019490 I 0.720
GLYMA06G19280 Glycine max GLYMA06G19280 I 0.718
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.717
Bra020992 Brassica rapa Bra020992 I 0.717
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.717
TCM_012087 Theobroma cacao TCM_012087 I 0.717
Lus10027695.g Linum usitatissimum Lus10027695.g I 0.711
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I 0.708
Lus10002384.g Linum usitatissimum Lus10002384.g I 0.707
MTR_5g049190 Medicago truncatula MTR_5g049190 I 0.702
30147.m013937 Ricinus communis 30147.m013937 I 0.702
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I 0.702
Bo7g106240 Brassica oleracea Bo7g106240 I 0.698
Pm024743 Prunus mume Pm024743 I 0.693
MDP0000215359 Malus domestica MDP0000215359 I 0.693
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.693
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I 0.692
MTR_3g077650 Medicago truncatula MTR_3g077650 I 0.686
Bra012579 Brassica rapa Bra012579 I 0.685
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I 0.677
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.677
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I 0.677
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.677
GSMUA_Achr6G06490_001 Musa acuminata GSMUA_Achr6G06490_001 I 0.675
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.675
Ca_17087 Cicer arietinum Ca_17087 I 0.669
Ca_07482 Cicer arietinum Ca_07482 I 0.664
Lus10039966.g Linum usitatissimum Lus10039966.g I 0.662