ONIVA04G00840 (Oryza nivara)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ONIVA04G00840 T276264_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.680 0.831
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.680 0.831
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.674 0.818
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA04G00840.1 Myb 3 34
ONIVA04G00840.1 Myb 40 85

Links

Other Myb/SANT family TFs
Other Oryza nivara TFs

262 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000812154 Malus domestica MDP0000812154 I 0.772
BRADI2G01960 Brachypodium distachyon BRADI2G01960 I 0.736
VIT_01s0011g03730 Vitis vinifera VIT_01s0011g03730 I 0.719
BGIOSGA002469 Oryza indica BGIOSGA002469 I 0.718
GRMZM2G096358 Zea mays GRMZM2G096358 I 0.718
GRMZM2G162709 Zea mays GRMZM2G162709 I 0.718
GSMUA_Achr3G01370_001 Musa acuminata GSMUA_Achr3G01370_001 I 0.718
GSMUA_Achr8G18460_001 Musa acuminata GSMUA_Achr8G18460_001 I 0.718
LPERR01G01750 Leersia perrieri LPERR01G01750 I 0.718
OB01G11750 Oryza brachyantha OB01G11750 I 0.718
OBART01G01830 Oryza barthii OBART01G01830 I 0.718
OGLUM01G02010 Oryza glumaepatula OGLUM01G02010 I 0.718
OLONG_008024 Oryza longistaminata OLONG_008024 I 0.718
OMERI01G01310 Oryza meridionalis OMERI01G01310 I 0.718
ONIVA01G01990 Oryza nivara ONIVA01G01990 I 0.718
ORGLA01G0016500 Oryza glaberrima ORGLA01G0016500 I 0.718
ORUFI01G01910 Oryza rufipogon ORUFI01G01910 I 0.718
OS01G0128000 Oryza sativa OS01G0128000 I 0.718
Sb03g007360 Sorghum bicolor Sb03g007360 I 0.718
Pavir.Ea00660 Panicum virgatum Pavir.Ea00660 I 0.718
Pavir.Eb00654 Panicum virgatum Pavir.Eb00654 I 0.718
GSMUA_Achr3G21060_001 Musa acuminata GSMUA_Achr3G21060_001 I 0.714
GSMUA_Achr6G09760_001 Musa acuminata GSMUA_Achr6G09760_001 I 0.713
F775_02803 Aegilops tauschii F775_02803 I 0.711
MLOC_65555 Hordeum vulgare MLOC_65555 I 0.711
TRAES3BF034000040CFD_g Triticum aestivum TRAES3BF034000040CFD_g I 0.711
TRIUR3_09345 Triticum urartu TRIUR3_09345 I 0.711
BGIOSGA026430 Oryza indica BGIOSGA026430 I 0.710
GSMUA_Achr2G22640_001 Musa acuminata GSMUA_Achr2G22640_001 I 0.710
OB07G32480 Oryza brachyantha OB07G32480 I 0.710
OBART07G26990 Oryza barthii OBART07G26990 I 0.710
OGLUM07G26960 Oryza glumaepatula OGLUM07G26960 I 0.710
OMERI07G23590 Oryza meridionalis OMERI07G23590 I 0.710
ONIVA07G26740 Oryza nivara ONIVA07G26740 I 0.710
OPUNC07G25360 Oryza punctata OPUNC07G25360 I 0.710
ORGLA07G0213800 Oryza glaberrima ORGLA07G0213800 I 0.710
ORUFI07G27930 Oryza rufipogon ORUFI07G27930 I 0.710
OS07G0688200 Oryza sativa OS07G0688200 I 0.710
Cla015409 Citrullus lanatus Cla015409 I 0.709
Cucsa.128620 Cucumis sativus Cucsa.128620 I 0.709
AMTR_s00079p00140660 Amborella trichopoda AMTR_s00079p00140660 I 0.705
Sb02g043420 Sorghum bicolor Sb02g043420 I 0.705
Si030584m.g Setaria italica Si030584m.g I 0.705
cassava12704.valid.m1 Manihot esculenta cassava12704.valid.m1 I 0.705
evm.TU.supercontig_3.501 Carica papaya evm.TU.supercontig_3.501 I 0.705
evm.TU.supercontig_3.502 Carica papaya evm.TU.supercontig_3.502 I 0.705
Pavir.Bb03718 Panicum virgatum Pavir.Bb03718 I 0.705
GSMUA_Achr11G13200_001 Musa acuminata GSMUA_Achr11G13200_001 I 0.704
TRIUR3_32110 Triticum urartu TRIUR3_32110 N 0.702
BGIOSGA035999 Oryza indica BGIOSGA035999 I 0.701
BRADI4G04627 Brachypodium distachyon BRADI4G04627 I 0.701
GRMZM2G143046 Zea mays GRMZM2G143046 I 0.701
GRMZM2G160840 Zea mays GRMZM2G160840 I 0.701
OB11G27320 Oryza brachyantha OB11G27320 I 0.701
OB12G22880 Oryza brachyantha OB12G22880 I 0.701
ORGLA12G0140200 Oryza glaberrima ORGLA12G0140200 I 0.701
ORUFI11G24630 Oryza rufipogon ORUFI11G24630 I 0.701
ORUFI12G17730 Oryza rufipogon ORUFI12G17730 I 0.701
JAMYB Oryza sativa OS11G0684000 I 0.701
Sb08g018370 Sorghum bicolor Sb08g018370 I 0.701
Sb09g002675 Sorghum bicolor Sb09g002675 I 0.701
Sb09g002680 Sorghum bicolor Sb09g002680 I 0.701
Si022474m.g Setaria italica Si022474m.g I 0.701
Si022831m.g Setaria italica Si022831m.g I 0.701
Traes_3AS_5E49D47AF Triticum aestivum Traes_3AS_5E49D47AF I 0.701
cassava46139.m1 Manihot esculenta cassava46139.m1 I 0.701
Pavir.Cb00499 Panicum virgatum Pavir.Cb00499 I 0.701
Pavir.J03771 Panicum virgatum Pavir.J03771 I 0.701
Traes_5AS_D9A4C1AB0 Triticum aestivum Traes_5AS_D9A4C1AB0 N 0.698
PK28164.1 Cannabis sativa PK28164.1 I 0.698
GRMZM2G425427 Zea mays GRMZM2G425427 I 0.697
Pavir.Ca00769 Panicum virgatum Pavir.Ca00769 I 0.697
BGIOSGA018863 Oryza indica BGIOSGA018863 I 0.696
BRADI2G38560 Brachypodium distachyon BRADI2G38560 I 0.696
F775_17094 Aegilops tauschii F775_17094 I 0.696
OB05G12230 Oryza brachyantha OB05G12230 I 0.696
OGLUM05G02350 Oryza glumaepatula OGLUM05G02350 I 0.696
OMERI05G02430 Oryza meridionalis OMERI05G02430 I 0.696
ONIVA05G02220 Oryza nivara ONIVA05G02220 I 0.696
OPUNC05G02190 Oryza punctata OPUNC05G02190 I 0.696
ORGLA05G0022200 Oryza glaberrima ORGLA05G0022200 I 0.696
ORUFI05G02420 Oryza rufipogon ORUFI05G02420 I 0.696
Traes_4BS_F83CB32DD Triticum aestivum Traes_4BS_F83CB32DD I 0.696
Traes_4DS_2A5B4C4C4 Triticum aestivum Traes_4DS_2A5B4C4C4 I 0.696
GSMUA_Achr10G19840_001 Musa acuminata GSMUA_Achr10G19840_001 I 0.694
GSMUA_Achr5G21090_001 Musa acuminata GSMUA_Achr5G21090_001 I 0.693
PGSC0003DMG400008761 Solanum tuberosum PGSC0003DMG400008761 I 0.693
PRUPE_ppa025672mg Prunus persica PRUPE_ppa025672mg I 0.693
Solyc01g057910.2 Solanum lycopersicum Solyc01g057910.2 I 0.693
Solyc05g053330.2 Solanum lycopersicum Solyc05g053330.2 I 0.693
VIT_05s0077g00500 Vitis vinifera VIT_05s0077g00500 I 0.693
ATMYB2 Vitis vinifera VIT_07s0005g01950 I 0.693
mgf015990m Mimulus guttatus mgf015990m I 0.693
Aquca_003_00440 Aquilegia coerulea Aquca_003_00440 I 0.693
evm.TU.contig_30289.2 Carica papaya evm.TU.contig_30289.2 I 0.693
gene05018-v1.0-hybrid Fragaria vesca gene05018-v1.0-hybrid I 0.693
Gorai.005G068900 Gossypium raimondii Gorai.005G068900 I 0.693
Gorai.011G203900 Gossypium raimondii Gorai.011G203900 I 0.693
MDP0000274300 Malus domestica MDP0000274300 I 0.693
PK21537.1 Cannabis sativa PK21537.1 I 0.693
GRMZM2G001824 Zea mays GRMZM2G001824 I 0.692
cassava11833.valid.m1 Manihot esculenta cassava11833.valid.m1 N 0.691
PGSC0003DMG400014550 Solanum tuberosum PGSC0003DMG400014550 I 0.689
Solyc05g009230.1 Solanum lycopersicum Solyc05g009230.1 I 0.689
TCM_009642 Theobroma cacao TCM_009642 I 0.689
evm.TU.supercontig_798.1 Carica papaya evm.TU.supercontig_798.1 I 0.689
Gorai.002G218600 Gossypium raimondii Gorai.002G218600 I 0.689
Lus10041435.g Linum usitatissimum Lus10041435.g I 0.689
Pavir.Ba00256 Panicum virgatum Pavir.Ba00256 I 0.689
GSMUA_Achr11G20830_001 Musa acuminata GSMUA_Achr11G20830_001 I 0.688
GSMUA_Achr9G16640_001 Musa acuminata GSMUA_Achr9G16640_001 I 0.688
PGSC0003DMG400027157 Solanum tuberosum PGSC0003DMG400027157 I 0.688
PGSC0003DMG401004611 Solanum tuberosum PGSC0003DMG401004611 I 0.688
mgf013798m Mimulus guttatus mgf013798m I 0.688
Cla018782 Citrullus lanatus Cla018782 I 0.687
Cucsa.121500 Cucumis sativus Cucsa.121500 I 0.687
LPERR07G23760 Leersia perrieri LPERR07G23760 I 0.686
AtMYB78 Arabidopsis thaliana AT5G49620 I 0.684
BGIOSGA010857 Oryza indica BGIOSGA010857 I 0.684
Bo7g092890 Brassica oleracea Bo7g092890 I 0.684
Bra010021 Brassica rapa Bra010021 I 0.684
Bra010022 Brassica rapa Bra010022 I 0.684
MYB78 Arabidopsis lyrata fgenesh2_kg.8__837__AT5G49620.1 I 0.684
LPERR03G13320 Leersia perrieri LPERR03G13320 I 0.684
OB03G25040 Oryza brachyantha OB03G25040 I 0.684
ORGLA03G0145100 Oryza glaberrima ORGLA03G0145100 I 0.684
MYB2 Oryza sativa OS03G0315400 I 0.684
PGSC0003DMG402004611 Solanum tuberosum PGSC0003DMG402004611 I 0.684
Sb01g037110 Sorghum bicolor Sb01g037110 I 0.684
Si035722m.g Setaria italica Si035722m.g I 0.684
TCM_021433 Theobroma cacao TCM_021433 I 0.684
cassava39393.m1 Manihot esculenta cassava39393.m1 I 0.684
Bostr.15774s0093 Boechera stricta Bostr.15774s0093 I 0.684
Cagra.3474s0016 Capsella grandiflora Cagra.3474s0016 I 0.684
Carubv10026871m.g Capsella rubella Carubv10026871m.g I 0.684
Lus10034338.g Linum usitatissimum Lus10034338.g I 0.684
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.684
Pavir.J28445 Panicum virgatum Pavir.J28445 I 0.684
Pavir.J39490 Panicum virgatum Pavir.J39490 I 0.684
Thhalv10004588m.g Eutrema salsugineum Thhalv10004588m.g I 0.684
Gorai.008G287100 Gossypium raimondii Gorai.008G287100 I 0.683
GRMZM2G131442 Zea mays GRMZM2G131442 I 0.682
Sb05g026820 Sorghum bicolor Sb05g026820 I 0.682
Traes_2AS_25C93FD291 Triticum aestivum Traes_2AS_25C93FD291 I 0.682
Traes_2AS_25C93FD29 Triticum aestivum Traes_2AS_25C93FD29 I 0.682
Traes_2BS_E8D2BD66E Triticum aestivum Traes_2BS_E8D2BD66E I 0.682
Traes_2DS_61B920833 Triticum aestivum Traes_2DS_61B920833 I 0.682
mgf001247m Mimulus guttatus mgf001247m N 0.681
MYB62 Arabidopsis thaliana AT1G68320 D 0.680
Bo2g057760 Brassica oleracea Bo2g057760 I 0.680
Bo6g106730 Brassica oleracea Bo6g106730 I 0.680
Bra004297 Brassica rapa Bra004297 I 0.680
MYB62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001171 I 0.680
GLYMA20G25110 Glycine max GLYMA20G25110 I 0.680
MTR_1g110460 Medicago truncatula MTR_1g110460 I 0.680
Ca_05503 Cicer arietinum Ca_05503 I 0.680
Cagra.1111s0025 Capsella grandiflora Cagra.1111s0025 I 0.680
Carubv10021411m.g Capsella rubella Carubv10021411m.g I 0.680
Gorai.006G265800 Gossypium raimondii Gorai.006G265800 I 0.680
Thhalv10018962m.g Eutrema salsugineum Thhalv10018962m.g I 0.680
LjT44F11.120.nd Lotus japonicus LjT44F11.120.nd I 0.680
Bo2g151810 Brassica oleracea Bo2g151810 I 0.679
Bra020624 Brassica rapa Bra020624 I 0.679
Bra033948 Brassica rapa Bra033948 I 0.679
GRMZM2G134279 Zea mays GRMZM2G134279 I 0.679
GRMZM2G330475 Zea mays GRMZM2G330475 I 0.679
GSMUA_Achr11G16130_001 Musa acuminata GSMUA_Achr11G16130_001 I 0.679
TCM_004878 Theobroma cacao TCM_004878 I 0.679
VIT_17s0000g03560 Vitis vinifera VIT_17s0000g03560 I 0.679
30076.m004607 Ricinus communis 30076.m004607 I 0.679
evm.TU.supercontig_49.71 Carica papaya evm.TU.supercontig_49.71 I 0.679
Gorai.004G145800 Gossypium raimondii Gorai.004G145800 I 0.679
Pm008425 Prunus mume Pm008425 I 0.678
Solyc12g099120.1 Solanum lycopersicum Solyc12g099120.1 I 0.677
Eucgr.B03006 Eucalyptus grandis Eucgr.B03006 I 0.677
GLYMA09G03690 Glycine max GLYMA09G03690 I 0.675
GLYMA15G14620 Glycine max GLYMA15G14620 I 0.675
MTR_2g033170 Medicago truncatula MTR_2g033170 I 0.675
POPTR_0010s13290 Populus trichocarpa POPTR_0010s13290 I 0.675
Solyc12g099140.1 Solanum lycopersicum Solyc12g099140.1 I 0.675
TRIUR3_23382 Triticum urartu TRIUR3_23382 N 0.675
Ca_08069 Cicer arietinum Ca_08069 I 0.675
evm.TU.supercontig_145.21 Carica papaya evm.TU.supercontig_145.21 I 0.675
SapurV1A.0078s0260 Salix purpurea SapurV1A.0078s0260 I 0.675
PK10896.1 Cannabis sativa PK10896.1 I 0.675
MYB108 Arabidopsis thaliana AT3G06490 D 0.674
Bo1g147890 Brassica oleracea Bo1g147890 I 0.674
Bo3g060620 Brassica oleracea Bo3g060620 I 0.674
Bo5g143460 Brassica oleracea Bo5g143460 I 0.674
Bra001202 Brassica rapa Bra001202 I 0.674
Bra029582 Brassica rapa Bra029582 I 0.674
Bra040274 Brassica rapa Bra040274 I 0.674
MYB108 Arabidopsis lyrata fgenesh2_kg.3__656__AT3G06490.1 I 0.674
GSMUA_Achr3G08370_001 Musa acuminata GSMUA_Achr3G08370_001 I 0.674
GSMUA_Achr3G12730_001 Musa acuminata GSMUA_Achr3G12730_001 I 0.674
GSMUA_Achr8G10800_001 Musa acuminata GSMUA_Achr8G10800_001 I 0.674
POPTR_0012s05200 Populus trichocarpa POPTR_0012s05200 I 0.674
POPTR_0015s03770 Populus trichocarpa POPTR_0015s03770 I 0.674
28271.m000023 Ricinus communis 28271.m000023 I 0.674
Bostr.2570s0008 Boechera stricta Bostr.2570s0008 I 0.674
Cagra.9553s0006 Capsella grandiflora Cagra.9553s0006 I 0.674
Carubv10014195m.g Capsella rubella Carubv10014195m.g I 0.674
SapurV1A.0989s0120 Salix purpurea SapurV1A.0989s0120 I 0.674
SapurV1A.1621s0010 Salix purpurea SapurV1A.1621s0010 I 0.674
SapurV1A.2885s0020 Salix purpurea SapurV1A.2885s0020 I 0.674
GSMUA_Achr1G24960_001 Musa acuminata GSMUA_Achr1G24960_001 I 0.673
PGSC0003DMG400004612 Solanum tuberosum PGSC0003DMG400004612 I 0.673
Si026574m.g Setaria italica Si026574m.g I 0.673
Solyc12g099130.1 Solanum lycopersicum Solyc12g099130.1 I 0.673
GLYMA07G36430 Glycine max GLYMA07G36430 I 0.671
GLYMA17G04171 Glycine max GLYMA17G04171 I 0.671
GSMUA_Achr7G05570_001 Musa acuminata GSMUA_Achr7G05570_001 I 0.671
PGSC0003DMG400005641 Solanum tuberosum PGSC0003DMG400005641 I 0.671
POPTR_0008s12130 Populus trichocarpa POPTR_0008s12130 I 0.671
PRUPE_ppa015973mg Prunus persica PRUPE_ppa015973mg I 0.671
Solyc03g119370.1 Solanum lycopersicum Solyc03g119370.1 I 0.671
Ca_03053 Cicer arietinum Ca_03053 I 0.671
Pm012912 Prunus mume Pm012912 I 0.671
Ciclev10015986m.g Citrus clementina Ciclev10015986m.g I 0.671
orange1.1g021188m.g Citrus sinensis orange1.1g021188m.g I 0.671
Bo6g097180 Brassica oleracea Bo6g097180 I 0.670
GLYMA10G41930 Glycine max GLYMA10G41930 I 0.670
Eucgr.B03985 Eucalyptus grandis Eucgr.B03985 I 0.670
SapurV1A.0530s0020 Salix purpurea SapurV1A.0530s0020 I 0.670
AMTR_s00003p00219710 Amborella trichopoda AMTR_s00003p00219710 I 0.669
BRADI1G64140 Brachypodium distachyon BRADI1G64140 I 0.669
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.669
POPTR_0008s10080 Populus trichocarpa POPTR_0008s10080 I 0.669
POPTR_0010s15970 Populus trichocarpa POPTR_0010s15970 I 0.669
Traes_3DS_A0676BAEA Triticum aestivum Traes_3DS_A0676BAEA I 0.669
Traes_4AS_E4294BADC Triticum aestivum Traes_4AS_E4294BADC I 0.669
Traes_4DL_9023F3504 Triticum aestivum Traes_4DL_9023F3504 I 0.669
cassava45669.m1 Manihot esculenta cassava45669.m1 I 0.669
Ciclev10005387m.g Citrus clementina Ciclev10005387m.g I 0.669
Lus10017096.g Linum usitatissimum Lus10017096.g I 0.669
Lus10037818.g Linum usitatissimum Lus10037818.g I 0.669
orange1.1g019911m.g Citrus sinensis orange1.1g019911m.g I 0.669
SapurV1A.0050s0080 Salix purpurea SapurV1A.0050s0080 I 0.669
SapurV1A.0114s0410 Salix purpurea SapurV1A.0114s0410 I 0.669
SapurV1A.6591s0010 Salix purpurea SapurV1A.6591s0010 I 0.669
Traes_1AS_36AF74187 Triticum aestivum Traes_1AS_36AF74187 I 0.668
orange1.1g020197m.g Citrus sinensis orange1.1g020197m.g I 0.667
F775_25534 Aegilops tauschii F775_25534 I 0.666
Bo5g043390 Brassica oleracea Bo5g043390 I 0.665
Bo7g050560 Brassica oleracea Bo7g050560 I 0.665
Bra012482 Brassica rapa Bra012482 I 0.665
TCM_012363 Theobroma cacao TCM_012363 I 0.665
Bostr.26959s0063 Boechera stricta Bostr.26959s0063 I 0.665
Eucgr.H00907 Eucalyptus grandis Eucgr.H00907 I 0.665
chr4.CM0042.760.nc Lotus japonicus chr4.CM0042.760.nc I 0.665
GSMUA_AchrUn_randomG27010_001 Musa acuminata GSMUA_AchrUn_randomG27010_001 I 0.664
Gorai.007G121000 Gossypium raimondii Gorai.007G121000 I 0.664
GSMUA_Achr11G04930_001 Musa acuminata GSMUA_Achr11G04930_001 I 0.663
OB01G22230 Oryza brachyantha OB01G22230 I 0.663
Si003873m.g Setaria italica Si003873m.g N 0.663
SapurV1A.0079s0020 Salix purpurea SapurV1A.0079s0020 I 0.662
Bra004041 Brassica rapa Bra004041 I 0.661
PRUPE_ppa008877mg Prunus persica PRUPE_ppa008877mg I 0.661
Cla019255 Citrullus lanatus Cla019255 I 0.661
Pm025177 Prunus mume Pm025177 I 0.661
cassava28986.valid.m1 Manihot esculenta cassava28986.valid.m1 I 0.661
MDP0000259898 Malus domestica MDP0000259898 I 0.661