ORGLA02G0010000 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA02G0010000 T276650_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.684 0.731
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.684 0.731
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.684 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA02G0010000.1 Myb 15 62
ORGLA02G0010000.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA007254 Oryza indica BGIOSGA007254 I 0.909
LPERR02G00910 Leersia perrieri LPERR02G00910 I 0.909
OB02G10930 Oryza brachyantha OB02G10930 I 0.909
OPUNC02G00570 Oryza punctata OPUNC02G00570 I 0.909
ORUFI02G01120 Oryza rufipogon ORUFI02G01120 I 0.909
BRADI3G01377 Brachypodium distachyon BRADI3G01377 I 0.884
F775_16743 Aegilops tauschii F775_16743 I 0.884
GRMZM2G088189 Zea mays GRMZM2G088189 I 0.884
MLOC_58869 Hordeum vulgare MLOC_58869 I 0.884
Sb04g001110 Sorghum bicolor Sb04g001110 I 0.884
Si017899m.g Setaria italica Si017899m.g I 0.884
Traes_6AS_7C1FD879C Triticum aestivum Traes_6AS_7C1FD879C I 0.884
Traes_6BS_B2C9F123A Triticum aestivum Traes_6BS_B2C9F123A I 0.884
Traes_6DS_8F05AE571 Triticum aestivum Traes_6DS_8F05AE571 I 0.884
TRIUR3_11495 Triticum urartu TRIUR3_11495 I 0.884
Pavir.Aa03518 Panicum virgatum Pavir.Aa03518 I 0.884
Pavir.J24194 Panicum virgatum Pavir.J24194 I 0.884
GSMUA_Achr1G17480_001 Musa acuminata GSMUA_Achr1G17480_001 N 0.758
VIT_16s0050g00050 Vitis vinifera VIT_16s0050g00050 I 0.735
Cla001724 Citrullus lanatus Cla001724 I 0.730
Eucgr.B01827 Eucalyptus grandis Eucgr.B01827 I 0.727
POPTR_0013s00290 Populus trichocarpa POPTR_0013s00290 I 0.718
SapurV1A.0442s0250 Salix purpurea SapurV1A.0442s0250 I 0.718
evm.TU.supercontig_107.47 Carica papaya evm.TU.supercontig_107.47 I 0.716
GSMUA_Achr8G11340_001 Musa acuminata GSMUA_Achr8G11340_001 I 0.712
PRUPE_ppa019729mg Prunus persica PRUPE_ppa019729mg I 0.712
Pm019344 Prunus mume Pm019344 I 0.712
Solyc03g025870.2 Solanum lycopersicum Solyc03g025870.2 I 0.711
Cucsa.313950 Cucumis sativus Cucsa.313950 I 0.711
PDK_20s1606731g001 Phoenix dactylifera PDK_20s1606731g001 I 0.711
Eucgr.K00250 Eucalyptus grandis Eucgr.K00250 I 0.710
gene13281-v1.0-hybrid Fragaria vesca gene13281-v1.0-hybrid I 0.710
Eucgr.K02806 Eucalyptus grandis Eucgr.K02806 I 0.709
PGSC0003DMG400014291 Solanum tuberosum PGSC0003DMG400014291 I 0.707
BRADI5G16672 Brachypodium distachyon BRADI5G16672 I 0.706
Traes_2BL_604FE7639 Triticum aestivum Traes_2BL_604FE7639 I 0.706
Sb06g023610 Sorghum bicolor Sb06g023610 I 0.702
Traes_2BL_03F3475CD Triticum aestivum Traes_2BL_03F3475CD I 0.702
Eucgr.A02796 Eucalyptus grandis Eucgr.A02796 I 0.702
F775_08647 Aegilops tauschii F775_08647 I 0.701
GRMZM2G170049 Zea mays GRMZM2G170049 I 0.701
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.701
Traes_6AL_D10CBA40D Triticum aestivum Traes_6AL_D10CBA40D I 0.701
Traes_6BL_CE61B9510 Triticum aestivum Traes_6BL_CE61B9510 I 0.701
Traes_6DL_A014E9069 Triticum aestivum Traes_6DL_A014E9069 I 0.701
TRIUR3_32691 Triticum urartu TRIUR3_32691 I 0.701
Si012304m.g Setaria italica Si012304m.g I 0.700
Pavir.Ga00879 Panicum virgatum Pavir.Ga00879 I 0.700
Pavir.Gb00734 Panicum virgatum Pavir.Gb00734 I 0.700
POPTR_0015s13190 Populus trichocarpa POPTR_0015s13190 I 0.699
Lus10027458.g Linum usitatissimum Lus10027458.g I 0.698
Lus10039213.g Linum usitatissimum Lus10039213.g I 0.698
MDP0000152575 Malus domestica MDP0000152575 I 0.698
cassava26284.m1 Manihot esculenta cassava26284.m1 I 0.697
PK18276.1 Cannabis sativa PK18276.1 I 0.697
BRADI3G49970 Brachypodium distachyon BRADI3G49970 I 0.696
VIT_17s0000g09080 Vitis vinifera VIT_17s0000g09080 I 0.696
Si017947m.g Setaria italica Si017947m.g I 0.695
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.692
OB04G26810 Oryza brachyantha OB04G26810 I 0.691
Traes_2AL_962A9D448 Triticum aestivum Traes_2AL_962A9D448 I 0.689
GSMUA_Achr4G29410_001 Musa acuminata GSMUA_Achr4G29410_001 I 0.688
LPERR04G16000 Leersia perrieri LPERR04G16000 I 0.688
MTR_1g100667 Medicago truncatula MTR_1g100667 I 0.687
Pavir.Ab02417 Panicum virgatum Pavir.Ab02417 I 0.686
BGIOSGA008698 Oryza indica BGIOSGA008698 I 0.685
GLYMA09G25655 Glycine max GLYMA09G25655 I 0.685
OB02G32950 Oryza brachyantha OB02G32950 I 0.685
OBART02G25570 Oryza barthii OBART02G25570 I 0.685
OMERI02G25080 Oryza meridionalis OMERI02G25080 I 0.685
ONIVA02G28010 Oryza nivara ONIVA02G28010 I 0.685
OPUNC02G23410 Oryza punctata OPUNC02G23410 I 0.685
MYB55 Arabidopsis thaliana AT4G01680 D 0.684
Bo9g004210 Brassica oleracea Bo9g004210 I 0.684
Bra036317 Brassica rapa Bra036317 I 0.684
MYB55 Arabidopsis lyrata fgenesh2_kg.6__3543__AT4G01680.1 I 0.684
GLYMA19G41250 Glycine max GLYMA19G41250 I 0.684
MTR_1g085040 Medicago truncatula MTR_1g085040 I 0.684
Ca_01072 Cicer arietinum Ca_01072 I 0.684
Ca_03589 Cicer arietinum Ca_03589 I 0.684
Bostr.4825s0008 Boechera stricta Bostr.4825s0008 I 0.684
Cagra.0334s0011 Capsella grandiflora Cagra.0334s0011 I 0.684
Carubv10001308m.g Capsella rubella Carubv10001308m.g I 0.684
GRMZM2G496770 Zea mays GRMZM2G496770 I 0.683
TCM_015157 Theobroma cacao TCM_015157 I 0.683
Ca_19758 Cicer arietinum Ca_19758 I 0.683
Cla005219 Citrullus lanatus Cla005219 I 0.683
Cucsa.051050 Cucumis sativus Cucsa.051050 I 0.683
MDP0000896053 Malus domestica MDP0000896053 I 0.683
GLYMA03G38660 Glycine max GLYMA03G38660 I 0.681
GLYMA20G22230 Glycine max GLYMA20G22230 I 0.681
OGLUM02G26100 Oryza glumaepatula OGLUM02G26100 I 0.681
Sb04g033680 Sorghum bicolor Sb04g033680 I 0.678
SapurV1A.0754s0180 Salix purpurea SapurV1A.0754s0180 I 0.678
chr5.CM0148.380.nc Lotus japonicus chr5.CM0148.380.nc I 0.678
ORUFI02G26980 Oryza rufipogon ORUFI02G26980 I 0.676
BGIOSGA016820 Oryza indica BGIOSGA016820 I 0.675
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.675
OBART04G19730 Oryza barthii OBART04G19730 I 0.675
OGLUM04G19590 Oryza glumaepatula OGLUM04G19590 I 0.675
OMERI04G16730 Oryza meridionalis OMERI04G16730 I 0.675
ONIVA04G17950 Oryza nivara ONIVA04G17950 I 0.675
OPUNC04G17450 Oryza punctata OPUNC04G17450 I 0.675
ORGLA04G0168700 Oryza glaberrima ORGLA04G0168700 I 0.675
ORGLA10G0151700 Oryza glaberrima ORGLA10G0151700 I 0.675
ORUFI04G21270 Oryza rufipogon ORUFI04G21270 I 0.675
OS04G0532800 Oryza sativa OS04G0532800 I 0.675
POPTR_0012s08600 Populus trichocarpa POPTR_0012s08600 I 0.675
POPTR_0015s09430 Populus trichocarpa POPTR_0015s09430 I 0.675
cassava19716.m1 Manihot esculenta cassava19716.m1 I 0.675
SapurV1A.0011s0520 Salix purpurea SapurV1A.0011s0520 I 0.675
SapurV1A.1253s0100 Salix purpurea SapurV1A.1253s0100 I 0.674
PRUPE_ppa019718mg Prunus persica PRUPE_ppa019718mg I 0.673
TCM_026853 Theobroma cacao TCM_026853 I 0.673
Pm003267 Prunus mume Pm003267 I 0.673
cassava12868.valid.m1 Manihot esculenta cassava12868.valid.m1 I 0.673
cassava17679.valid.m1 Manihot esculenta cassava17679.valid.m1 I 0.673
gene22961-v1.0-hybrid Fragaria vesca gene22961-v1.0-hybrid I 0.673
MDP0000653903 Malus domestica MDP0000653903 I 0.673
PK03176.1 Cannabis sativa PK03176.1 I 0.673
GRMZM2G119693 Zea mays GRMZM2G119693 I 0.672
GSMUA_Achr2G11450_001 Musa acuminata GSMUA_Achr2G11450_001 N 0.672
GLYMA04G36110 Glycine max GLYMA04G36110 I 0.671
GLYMA05G02550 Glycine max GLYMA05G02550 I 0.671
GLYMA06G18830 Glycine max GLYMA06G18830 I 0.671
PGSC0003DMG400027077 Solanum tuberosum PGSC0003DMG400027077 I 0.671
PRUPE_ppa018561mg Prunus persica PRUPE_ppa018561mg I 0.671
Solyc06g071690.2 Solanum lycopersicum Solyc06g071690.2 I 0.671
TCM_012174 Theobroma cacao TCM_012174 I 0.671
Cla003497 Citrullus lanatus Cla003497 I 0.671
Pm024326 Prunus mume Pm024326 I 0.671
30147.m013885 Ricinus communis 30147.m013885 I 0.671
cassava33965.m1 Manihot esculenta cassava33965.m1 I 0.671
Cucsa.098700 Cucumis sativus Cucsa.098700 I 0.671
Ciclev10024338m.g Citrus clementina Ciclev10024338m.g I 0.671
evm.TU.supercontig_110.11 Carica papaya evm.TU.supercontig_110.11 I 0.671
gene09845-v1.0-hybrid Fragaria vesca gene09845-v1.0-hybrid I 0.671
orange1.1g016021m.g Citrus sinensis orange1.1g016021m.g I 0.671
PK22647.1 Cannabis sativa PK22647.1 I 0.671
GSMUA_Achr11G00430_001 Musa acuminata GSMUA_Achr11G00430_001 I 0.670
GSMUA_Achr11G15910_001 Musa acuminata GSMUA_Achr11G15910_001 I 0.670
GSMUA_Achr2G18440_001 Musa acuminata GSMUA_Achr2G18440_001 I 0.670
GSMUA_Achr5G18400_001 Musa acuminata GSMUA_Achr5G18400_001 I 0.670
MDP0000601420 Malus domestica MDP0000601420 I 0.670
MDP0000932804 Malus domestica MDP0000932804 I 0.670
AMTR_s00036p00107460 Amborella trichopoda AMTR_s00036p00107460 I 0.669
F775_52175 Aegilops tauschii F775_52175 N 0.668
MLOC_73614 Hordeum vulgare MLOC_73614 I 0.668
Traes_2AL_2D4100475 Triticum aestivum Traes_2AL_2D4100475 I 0.668
Traes_2BL_35241DE8D Triticum aestivum Traes_2BL_35241DE8D I 0.668
Traes_2BL_7CEC6A8D7 Triticum aestivum Traes_2BL_7CEC6A8D7 I 0.668
Eucgr.B00229 Eucalyptus grandis Eucgr.B00229 I 0.668
MDP0000256645 Malus domestica MDP0000256645 I 0.668
MDP0000852549 Malus domestica MDP0000852549 I 0.668
BRADI2G36730 Brachypodium distachyon BRADI2G36730 I 0.667
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.667
Eucgr.K00251 Eucalyptus grandis Eucgr.K00251 N 0.667
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.667
BGIOSGA010658 Oryza indica BGIOSGA010658 I 0.666
BGIOSGA026208 Oryza indica BGIOSGA026208 I 0.666
GLYMA17G09310 Glycine max GLYMA17G09310 I 0.666
GRMZM2G147698 Zea mays GRMZM2G147698 I 0.666
GRMZM2G150841 Zea mays GRMZM2G150841 I 0.666
LPERR07G20400 Leersia perrieri LPERR07G20400 I 0.666
OGLUM07G23470 Oryza glumaepatula OGLUM07G23470 I 0.666
OMERI03G17220 Oryza meridionalis OMERI03G17220 I 0.666
OMERI07G19830 Oryza meridionalis OMERI07G19830 I 0.666
ONIVA02G07540 Oryza nivara ONIVA02G07540 I 0.666
OPUNC07G22080 Oryza punctata OPUNC07G22080 I 0.666
ORGLA07G0264800 Oryza glaberrima ORGLA07G0264800 I 0.666
ORUFI07G24600 Oryza rufipogon ORUFI07G24600 I 0.666
POPTR_0012s13240 Populus trichocarpa POPTR_0012s13240 I 0.666
Sb02g040480 Sorghum bicolor Sb02g040480 I 0.666
SELMODRAFT_437219 Selaginella moellendorffii SELMODRAFT_437219 I 0.666
Si029872m.g Setaria italica Si029872m.g I 0.666
Si036638m.g Setaria italica Si036638m.g I 0.666
Cla019513 Citrullus lanatus Cla019513 I 0.666
Cucsa.196550 Cucumis sativus Cucsa.196550 I 0.666
Aquca_011_00538 Aquilegia coerulea Aquca_011_00538 I 0.666
Pavir.J03230 Panicum virgatum Pavir.J03230 I 0.666
SapurV1A.1253s0080 Salix purpurea SapurV1A.1253s0080 I 0.666
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I 0.665
BRADI1G20250 Brachypodium distachyon BRADI1G20250 I 0.664
F775_28584 Aegilops tauschii F775_28584 I 0.664
MLOC_59663 Hordeum vulgare MLOC_59663 I 0.664
Traes_1AS_1EE692FDC Triticum aestivum Traes_1AS_1EE692FDC I 0.664
Traes_1BS_92EA1F290 Triticum aestivum Traes_1BS_92EA1F290 I 0.664
Traes_1DS_5BAD8947E Triticum aestivum Traes_1DS_5BAD8947E I 0.664
TRIUR3_15020 Triticum urartu TRIUR3_15020 I 0.664
Traes_2AS_731C703DE Triticum aestivum Traes_2AS_731C703DE I 0.663
Traes_2BS_E1E541767 Triticum aestivum Traes_2BS_E1E541767 I 0.663
Traes_2DS_3569AEDFB Triticum aestivum Traes_2DS_3569AEDFB I 0.663
Eucgr.K00555 Eucalyptus grandis Eucgr.K00555 I 0.663
chr1.CM0206.990.nd Lotus japonicus chr1.CM0206.990.nd I 0.663
GLYMA02G00960 Glycine max GLYMA02G00960 I 0.662
GLYMA03G38410 Glycine max GLYMA03G38410 I 0.662
GLYMA10G27940 Glycine max GLYMA10G27940 I 0.662
GLYMA19G41010 Glycine max GLYMA19G41010 I 0.662
MTR_7g110830 Medicago truncatula MTR_7g110830 I 0.662
POPTR_0014s10680 Populus trichocarpa POPTR_0014s10680 I 0.662
TCM_004965 Theobroma cacao TCM_004965 I 0.662
Ca_03564 Cicer arietinum Ca_03564 I 0.662
cassava33008.m1 Manihot esculenta cassava33008.m1 I 0.662
Ciclev10020144m.g Citrus clementina Ciclev10020144m.g I 0.662
Gorai.001G148500 Gossypium raimondii Gorai.001G148500 I 0.662
Gorai.004G147600 Gossypium raimondii Gorai.004G147600 I 0.662
Gorai.007G118200 Gossypium raimondii Gorai.007G118200 I 0.662
Gorai.008G133700 Gossypium raimondii Gorai.008G133700 I 0.662
Lus10038022.g Linum usitatissimum Lus10038022.g I 0.662
orange1.1g013300m.g Citrus sinensis orange1.1g013300m.g I 0.662
SapurV1A.0264s0440 Salix purpurea SapurV1A.0264s0440 I 0.662
SapurV1A.0321s0070 Salix purpurea SapurV1A.0321s0070 I 0.662
SapurV1A.3474s0020 Salix purpurea SapurV1A.3474s0020 I 0.662
chr5.CM0048.320.nd Lotus japonicus chr5.CM0048.320.nd I 0.662
BGIOSGA019160 Oryza indica BGIOSGA019160 I 0.661
GLYMA10G38110 Glycine max GLYMA10G38110 I 0.661
GLYMA20G29710 Glycine max GLYMA20G29710 I 0.661
GRMZM2G127490 Zea mays GRMZM2G127490 I 0.661
GRMZM2G171781 Zea mays GRMZM2G171781 I 0.661
LPERR05G02400 Leersia perrieri LPERR05G02400 I 0.661
OB05G12630 Oryza brachyantha OB05G12630 I 0.661
OBART05G02690 Oryza barthii OBART05G02690 I 0.661
OGLUM05G02680 Oryza glumaepatula OGLUM05G02680 I 0.661
OLONG_008768 Oryza longistaminata OLONG_008768 I 0.661
OMERI05G02610 Oryza meridionalis OMERI05G02610 I 0.661
ONIVA05G02580 Oryza nivara ONIVA05G02580 I 0.661
OPUNC05G02540 Oryza punctata OPUNC05G02540 I 0.661
ORGLA05G0025500 Oryza glaberrima ORGLA05G0025500 I 0.661
ORUFI05G02790 Oryza rufipogon ORUFI05G02790 I 0.661
OS05G0140100 Oryza sativa OS05G0140100 I 0.661
Sb03g011640 Sorghum bicolor Sb03g011640 I 0.661
Si001565m.g Setaria italica Si001565m.g I 0.661
Si022113m.g Setaria italica Si022113m.g I 0.661
Eucgr.B02197 Eucalyptus grandis Eucgr.B02197 I 0.661
Pavir.Ea01054 Panicum virgatum Pavir.Ea01054 I 0.661
Pavir.Eb01178 Panicum virgatum Pavir.Eb01178 I 0.661
Pavir.J40848 Panicum virgatum Pavir.J40848 I 0.661