CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc11g050730.1
(
Solanum lycopersicum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Solyc11g050730.1
T280278_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc11g050730.1.1
Myb
55
102
GNPWTEDEQTAFLKGLDFHGKGNWSKIAKDFVPSRTSTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Solanum lycopersicum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400034516
Solanum tuberosum
PGSC0003DMG400034516
N
0.877
PGSC0003DMG400034640
Solanum tuberosum
PGSC0003DMG400034640
N
0.847
Solyc11g013560.1
Solanum lycopersicum
Solyc11g013560.1
N
0.800
Solyc11g013620.1
Solanum lycopersicum
Solyc11g013620.1
N
0.800
Solyc10g019150.1
Solanum lycopersicum
Solyc10g019150.1
N
0.795
PGSC0003DMG400027794
Solanum tuberosum
PGSC0003DMG400027794
N
0.739
Bo2g082370
Brassica oleracea
Bo2g082370
I
0.729
PGSC0003DMG400036212
Solanum tuberosum
PGSC0003DMG400036212
I
0.722
Bra008169
Brassica rapa
Bra008169
I
0.721
Solyc05g013420.1
Solanum lycopersicum
Solyc05g013420.1
I
0.710
PGSC0003DMG400018620
Solanum tuberosum
PGSC0003DMG400018620
N
0.706
LjSGA_061558.1
Lotus japonicus
LjSGA_061558.1
I
0.693
GLYMA06G05450
Glycine max
GLYMA06G05450
I
0.682
GLYMA18G17143
Glycine max
GLYMA18G17143
I
0.674
MTR_3g104370
Medicago truncatula
MTR_3g104370
I
0.661