CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf018559m
(
Mimulus guttatus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
mgf018559m
T285330_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.712
0.809
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.697
0.787
e_gw1.362.4.1
M02341_2.00
Physcomitrella patens
NNNRDATCNN
NNGATHYNNN
PBM
Weirauch et al.(2014)
pTH8461
0.673
0.787
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00
Ostreococcus tauri
NNNDATCN
NGATHNNN
PBM
Weirauch et al.(2014)
pTH9644
0.665
0.745
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf018559m
Myb
197
247
RVMWSKKLHEQFISAVNQIGSDKAVPKKILEVMNVPGLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Mimulus guttatus
TFs
102 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo1g055180
Brassica oleracea
Bo1g055180
I
0.712
Bra033527
Brassica rapa
Bra033527
I
0.712
GLYMA07G37220
Glycine max
GLYMA07G37220
I
0.712
GLYMA15G15520
Glycine max
GLYMA15G15520
I
0.712
GLYMA17G03380
Glycine max
GLYMA17G03380
I
0.712
GSMUA_Achr9G16610_001
Musa acuminata
GSMUA_Achr9G16610_001
I
0.712
MTR_4g121020
Medicago truncatula
MTR_4g121020
I
0.712
PGSC0003DMG400023534
Solanum tuberosum
PGSC0003DMG400023534
I
0.712
PGSC0003DMG401025624
Solanum tuberosum
PGSC0003DMG401025624
I
0.712
POPTR_0008s22990
Populus trichocarpa
POPTR_0008s22990
I
0.712
POPTR_0010s00320
Populus trichocarpa
POPTR_0010s00320
I
0.712
PRUPE_ppa002408mg
Prunus persica
PRUPE_ppa002408mg
I
0.712
ARR2
Arabidopsis lyrata
scaffold_702902.1
I
0.712
SELMODRAFT_173793
Selaginella moellendorffii
SELMODRAFT_173793
I
0.712
SELMODRAFT_450181
Selaginella moellendorffii
SELMODRAFT_450181
I
0.712
Solyc01g065540.2
Solanum lycopersicum
Solyc01g065540.2
I
0.712
Solyc05g054390.2
Solanum lycopersicum
Solyc05g054390.2
I
0.712
TCM_021300
Theobroma cacao
TCM_021300
I
0.712
VIT_05s0077g01480
Vitis vinifera
VIT_05s0077g01480
I
0.712
Ca_02989
Cicer arietinum
Ca_02989
I
0.712
Cla009424
Citrullus lanatus
Cla009424
I
0.712
Cla022101
Citrullus lanatus
Cla022101
I
0.712
29889.m003245
Ricinus communis
29889.m003245
I
0.712
cassava43032.valid.m1
Manihot esculenta
cassava43032.valid.m1
I
0.712
Cucsa.252760
Cucumis sativus
Cucsa.252760
I
0.712
Aquca_003_00615
Aquilegia coerulea
Aquca_003_00615
I
0.712
Bostr.30275s0051
Boechera stricta
Bostr.30275s0051
I
0.712
Cagra.0053s0018
Capsella grandiflora
Cagra.0053s0018
I
0.712
Carubv10007581m.g
Capsella rubella
Carubv10007581m.g
I
0.712
Ciclev10004470m.g
Citrus clementina
Ciclev10004470m.g
I
0.712
Eucgr.A00189
Eucalyptus grandis
Eucgr.A00189
I
0.712
evm.TU.supercontig_9.105
Carica papaya
evm.TU.supercontig_9.105
I
0.712
Gorai.002G029200
Gossypium raimondii
Gorai.002G029200
I
0.712
Gorai.011G196400
Gossypium raimondii
Gorai.011G196400
I
0.712
Lus10016846.g
Linum usitatissimum
Lus10016846.g
I
0.712
Lus10037719.g
Linum usitatissimum
Lus10037719.g
I
0.712
MDP0000224740
Malus domestica
MDP0000224740
I
0.712
MDP0000290818
Malus domestica
MDP0000290818
I
0.712
Thhalv10024686m.g
Eutrema salsugineum
Thhalv10024686m.g
I
0.712
PK26059.1
Cannabis sativa
PK26059.1
I
0.712
AMTR_s00176p00045260
Amborella trichopoda
AMTR_s00176p00045260
I
0.705
GLYMA02G09451
Glycine max
GLYMA02G09451
I
0.705
GLYMA07G26890
Glycine max
GLYMA07G26890
I
0.705
GSMUA_Achr1G22230_001
Musa acuminata
GSMUA_Achr1G22230_001
I
0.705
GSMUA_Achr8G30850_001
Musa acuminata
GSMUA_Achr8G30850_001
I
0.705
MTR_1g032570
Medicago truncatula
MTR_1g032570
I
0.705
PGSC0003DMG400029514
Solanum tuberosum
PGSC0003DMG400029514
I
0.705
POPTR_0010s11600
Populus trichocarpa
POPTR_0010s11600
I
0.705
Solyc04g008050.2
Solanum lycopersicum
Solyc04g008050.2
I
0.705
TCM_011067
Theobroma cacao
TCM_011067
I
0.705
ARR14
Vitis vinifera
VIT_01s0011g05830
I
0.705
Ca_15151
Cicer arietinum
Ca_15151
I
0.705
27647.m000179
Ricinus communis
27647.m000179
I
0.705
Aquca_091_00086
Aquilegia coerulea
Aquca_091_00086
I
0.705
Ciclev10014527m.g
Citrus clementina
Ciclev10014527m.g
I
0.705
Eucgr.G02094
Eucalyptus grandis
Eucgr.G02094
I
0.705
evm.TU.supercontig_2.186
Carica papaya
evm.TU.supercontig_2.186
I
0.705
Gorai.005G156900
Gossypium raimondii
Gorai.005G156900
I
0.705
MDP0000124301
Malus domestica
MDP0000124301
I
0.705
MDP0000155328
Malus domestica
MDP0000155328
I
0.705
orange1.1g005938m.g
Citrus sinensis
orange1.1g005938m.g
I
0.705
SapurV1A.0055s0320
Salix purpurea
SapurV1A.0055s0320
I
0.705
PRUPE_ppa002493mg
Prunus persica
PRUPE_ppa002493mg
I
0.703
Pm005877
Prunus mume
Pm005877
I
0.703
mgf010113m
Mimulus guttatus
mgf010113m
I
0.703
mgf012203m
Mimulus guttatus
mgf012203m
I
0.703
Bostr.0556s0001
Boechera stricta
Bostr.0556s0001
I
0.703
Cagra.2235s0034
Capsella grandiflora
Cagra.2235s0034
I
0.703
Carubv10018465m.g
Capsella rubella
Carubv10018465m.g
I
0.703
Ca_14780
Cicer arietinum
Ca_14780
I
0.702
estExt_Genewise1.C_90203
Chlorella NC64A
estExt_Genewise1.C_90203
I
0.699
AMTR_s00057p00108840
Amborella trichopoda
AMTR_s00057p00108840
I
0.697
ARR1
Arabidopsis thaliana
AT3G16857
D
0.697
Bo3g068550
Brassica oleracea
Bo3g068550
I
0.697
Bo5g123620
Brassica oleracea
Bo5g123620
I
0.697
Bra001643
Brassica rapa
Bra001643
I
0.697
Bra022183
Brassica rapa
Bra022183
I
0.697
ARR1
Arabidopsis lyrata
fgenesh2_kg.3__1853__AT3G16857.2
I
0.697
Bostr.28625s0008
Boechera stricta
Bostr.28625s0008
I
0.697
Cagra.5497s0018
Capsella grandiflora
Cagra.5497s0018
I
0.697
Carubv10013107m.g
Capsella rubella
Carubv10013107m.g
I
0.697
Gorai.006G259700
Gossypium raimondii
Gorai.006G259700
I
0.697
gene05178-v1.0-hybrid
Fragaria vesca
gene05178-v1.0-hybrid
I
0.692
AMTR_s00086p00182350
Amborella trichopoda
AMTR_s00086p00182350
I
0.689
PDK_20s13009423g003
Phoenix dactylifera
PDK_20s13009423g003
I
0.686
Si007844m.g
Setaria italica
Si007844m.g
I
0.682
PRUPE_ppa018934mg
Prunus persica
PRUPE_ppa018934mg
I
0.674
Pm027701
Prunus mume
Pm027701
I
0.674
SELMODRAFT_187683
Selaginella moellendorffii
SELMODRAFT_187683
I
0.673
SELMODRAFT_418787
Selaginella moellendorffii
SELMODRAFT_418787
I
0.673
e_gw1.362.4.1
Physcomitrella patens
e_gw1.362.4.1
D
0.673
SapurV1A.0739s0030
Salix purpurea
SapurV1A.0739s0030
I
0.673
GLYMA09G04470
Glycine max
GLYMA09G04470
I
0.670
Pavir.Db00757
Panicum virgatum
Pavir.Db00757
N
0.670
Pavir.J10177
Panicum virgatum
Pavir.J10177
N
0.670
Cucsa.069440
Cucumis sativus
Cucsa.069440
I
0.666
OSTLU_5500
Ostreococcus lucimarinus
OSTLU_5500
I
0.665
e_gw1.1.649.1
Ostreococcus RCC809
e_gw1.1.649.1
I
0.665
EuGene.0000130210
Micromonas pusilla
EuGene.0000130210
I
0.665
estExt_fgenesh2_pg.C_Chr_100175
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_100175
I
0.665
estExt_fgenesh1_pg.C_Chr_16.00010090
Ostreococcus tauri
estExt_fgenesh1_pg.C_Chr_16.00010090
D
0.665
PDK_20s1887621g001
Phoenix dactylifera
PDK_20s1887621g001
I
0.662