CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.7160s0001
(
Capsella grandiflora
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cagra.7160s0001
T286187_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.7160s0001.1.p
Myb
2
27
LRWSLIAGRLPERTANDVKNYWNTNL
Links
Other
Myb/SANT
family TFs
Other
Capsella grandiflora
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava2659.m1
Manihot esculenta
cassava2659.m1
N
0.852
GLYMA0041S00310
Glycine max
GLYMA0041S00310
I
0.782
cassava2662.m1
Manihot esculenta
cassava2662.m1
N
0.780
Gorai.001G239000
Gossypium raimondii
Gorai.001G239000
I
0.780
SapurV1A.0876s0040
Salix purpurea
SapurV1A.0876s0040
I
0.769
AMTR_s00133p00075670
Amborella trichopoda
AMTR_s00133p00075670
N
0.757
mg021480m
Mimulus guttatus
mg021480m
N
0.755
MYB3
Arabidopsis thaliana
AT1G22640
D
0.748
e_gw1.1.4.1
Physcomitrella patens
e_gw1.1.4.1
N
0.742
GRMZM2G001223
Zea mays
GRMZM2G001223
I
0.742
MDP0000911051
Malus domestica
MDP0000911051
N
0.742
AMTR_s00009p00257950
Amborella trichopoda
AMTR_s00009p00257950
N
0.738
evm.TU.supercontig_34.3
Carica papaya
evm.TU.supercontig_34.3
N
0.738
OS04G0517100
Oryza sativa
OS04G0517100
N
0.734
MYB95
Arabidopsis thaliana
AT1G74430
N
0.729
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.721
MTR_5g079140
Medicago truncatula
MTR_5g079140
N
0.719
OS01G0685400
Oryza sativa
OS01G0685400
N
0.713
Ciclev10023519m.g
Citrus clementina
Ciclev10023519m.g
N
0.712
Traes_5AS_D238844BB
Triticum aestivum
Traes_5AS_D238844BB
N
0.710
OLONG_005719
Oryza longistaminata
OLONG_005719
N
0.709
gene16736-v1.0-hybrid
Fragaria vesca
gene16736-v1.0-hybrid
N
0.705
mgf017705m
Mimulus guttatus
mgf017705m
N
0.689
ATY13
Arabidopsis thaliana
AT1G74650
D
0.679
MLOC_68511
Hordeum vulgare
MLOC_68511
I
0.679
Gorai.008G086400
Gossypium raimondii
Gorai.008G086400
I
0.672
PK21717.1
Cannabis sativa
PK21717.1
N
0.672
MLOC_12474
Hordeum vulgare
MLOC_12474
N
0.669