MDP0000168728 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000168728 T288357_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB15
M07084_2.00 		Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN		 Dap-seq
OMalley et al.(2016)
ATY19_col_a 		0.707 0.839
MYB15
M02699_2.00 		Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG		 SELEX
Mathelier et al.(2014)
MA0574.1 		0.707 0.839
MYB15
M11041_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_01 		0.707 0.839
MYB15
M11042_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_Q2 		0.707 0.839
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.679 0.747
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.679 0.747
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.665 0.782
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.665 0.782
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000168728 Myb 14 61
MDP0000168728 Myb 67 106

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

236 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000230141 Malus domestica MDP0000230141 I 0.852
MDP0000435315 Malus domestica MDP0000435315 I 0.852
PRUPE_ppa020190mg Prunus persica PRUPE_ppa020190mg I 0.849
Pm009364 Prunus mume Pm009364 I 0.832
TRIUR3_12301 Triticum urartu TRIUR3_12301 I 0.767
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.763
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.763
gene11462-v1.0-hybrid Fragaria vesca gene11462-v1.0-hybrid I 0.763
PK20358.1 Cannabis sativa PK20358.1 I 0.760
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.752
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.748
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.748
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.747
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I 0.747
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.747
TCM_020889 Theobroma cacao TCM_020889 I 0.745
Pavir.Aa01310 Panicum virgatum Pavir.Aa01310 I 0.744
Pavir.Ab02340 Panicum virgatum Pavir.Ab02340 I 0.744
cassava35427.valid.m1 Manihot esculenta cassava35427.valid.m1 I 0.743
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.743
F775_30010 Aegilops tauschii F775_30010 I 0.742
Pm020596 Prunus mume Pm020596 I 0.742
MDP0000897594 Malus domestica MDP0000897594 I 0.742
PK03488.1 Cannabis sativa PK03488.1 I 0.742
VIT_05s0049g01010 Vitis vinifera VIT_05s0049g01010 I 0.740
Bo3g081700 Brassica oleracea Bo3g081700 I 0.737
Bo7g040780 Brassica oleracea Bo7g040780 I 0.737
Bra001907 Brassica rapa Bra001907 I 0.737
Bra014929 Brassica rapa Bra014929 I 0.737
MYB15 Arabidopsis lyrata fgenesh2_kg.3__2539__AT3G23250.1 I 0.737
Bostr.19424s0318 Boechera stricta Bostr.19424s0318 I 0.737
Cagra.2181s0015 Capsella grandiflora Cagra.2181s0015 I 0.737
Carubv10015750m.g Capsella rubella Carubv10015750m.g I 0.737
Thhalv10022110m.g Eutrema salsugineum Thhalv10022110m.g I 0.737
TCM_004046 Theobroma cacao TCM_004046 I 0.736
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.736
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.736
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.736
GRMZM2G095904 Zea mays GRMZM2G095904 I 0.735
MTR_1g076150 Medicago truncatula MTR_1g076150 I 0.734
chr5.CM0071.410.nd Lotus japonicus chr5.CM0071.410.nd I 0.734
GRMZM2G127857 Zea mays GRMZM2G127857 I 0.733
Lus10003557.g Linum usitatissimum Lus10003557.g I 0.729
PGSC0003DMG400023405 Solanum tuberosum PGSC0003DMG400023405 I 0.728
Solyc05g055030.1 Solanum lycopersicum Solyc05g055030.1 I 0.728
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.727
POPTR_0002s03960 Populus trichocarpa POPTR_0002s03960 I 0.727
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.727
cassava3286.m1 Manihot esculenta cassava3286.m1 I 0.727
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.727
SapurV1A.1746s0010 Salix purpurea SapurV1A.1746s0010 I 0.727
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I 0.726
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.724
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.722
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I 0.722
BRADI3G49180 Brachypodium distachyon BRADI3G49180 I 0.720
BRADI3G49190 Brachypodium distachyon BRADI3G49190 I 0.720
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.720
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I 0.720
Cla006077 Citrullus lanatus Cla006077 I 0.719
SapurV1A.0021s0930 Salix purpurea SapurV1A.0021s0930 I 0.719
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I 0.718
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.716
Pavir.Gb00587 Panicum virgatum Pavir.Gb00587 I 0.716
Si018182m.g Setaria italica Si018182m.g I 0.714
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I 0.713
Ca_12130 Cicer arietinum Ca_12130 I 0.713
F775_29501 Aegilops tauschii F775_29501 I 0.712
Traes_6AL_54D562BC2 Triticum aestivum Traes_6AL_54D562BC2 I 0.712
Traes_6AL_E1D3D8DAA1 Triticum aestivum Traes_6AL_E1D3D8DAA1 I 0.712
Cla007705 Citrullus lanatus Cla007705 I 0.712
Cucsa.383620 Cucumis sativus Cucsa.383620 I 0.712
Lus10033889.g Linum usitatissimum Lus10033889.g I 0.712
GSMUA_Achr1G09180_001 Musa acuminata GSMUA_Achr1G09180_001 I 0.711
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.711
chr6.CM1613.30.nc Lotus japonicus chr6.CM1613.30.nc I 0.711
BGIOSGA006005 Oryza indica BGIOSGA006005 I 0.710
ORGLA02G0213400 Oryza glaberrima ORGLA02G0213400 I 0.710
ORUFI02G25970 Oryza rufipogon ORUFI02G25970 I 0.710
MYB30 Oryza sativa OS02G0624300 I 0.710
Aquca_017_00716 Aquilegia coerulea Aquca_017_00716 I 0.710
OB04G25860 Oryza brachyantha OB04G25860 I 0.708
Sb06g022660 Sorghum bicolor Sb06g022660 I 0.708
MYB15 Arabidopsis thaliana AT3G23250 D 0.707
Bo1g102190 Brassica oleracea Bo1g102190 I 0.707
Bra023742 Brassica rapa Bra023742 I 0.707
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.707
PGSC0003DMG400011243 Solanum tuberosum PGSC0003DMG400011243 I 0.705
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.705
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.704
MLOC_34646 Hordeum vulgare MLOC_34646 I 0.703
Sb04g026480 Sorghum bicolor Sb04g026480 I 0.703
Traes_6AL_BB730675A Triticum aestivum Traes_6AL_BB730675A I 0.703
Traes_6BL_E5A9546C9 Triticum aestivum Traes_6BL_E5A9546C9 I 0.703
Traes_6DL_991931CF9 Triticum aestivum Traes_6DL_991931CF9 I 0.703
Traes_6DL_BBAC725C3 Triticum aestivum Traes_6DL_BBAC725C3 I 0.703
TRIUR3_12302 Triticum urartu TRIUR3_12302 I 0.703
Ca_12226 Cicer arietinum Ca_12226 I 0.703
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.703
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.702
OB02G31990 Oryza brachyantha OB02G31990 I 0.701
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.701
GLYMA02G00820 Glycine max GLYMA02G00820 I 0.700
GLYMA10G00930 Glycine max GLYMA10G00930 I 0.700
GLYMA19G34740 Glycine max GLYMA19G34740 I 0.700
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I 0.699
VIT_19s0085g00050 Vitis vinifera VIT_19s0085g00050 I 0.698
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I 0.698
AC206901.3_FG005 Zea mays AC206901.3_FG005 I 0.697
GLYMA08G17861 Glycine max GLYMA08G17861 I 0.697
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.697
SapurV1A.0483s0100 Salix purpurea SapurV1A.0483s0100 I 0.697
MTR_7g096930 Medicago truncatula MTR_7g096930 I 0.696
TCM_032927 Theobroma cacao TCM_032927 I 0.696
cassava38174.valid.m1 Manihot esculenta cassava38174.valid.m1 I 0.695
Traes_6DL_67FD04DA0 Triticum aestivum Traes_6DL_67FD04DA0 N 0.694
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.693
POPTR_0019s03490 Populus trichocarpa POPTR_0019s03490 I 0.693
VIT_05s0049g01020 Vitis vinifera VIT_05s0049g01020 I 0.693
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I 0.692
OB04G30570 Oryza brachyantha OB04G30570 I 0.692
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.692
PRUPE_ppa026315mg Prunus persica PRUPE_ppa026315mg I 0.691
Si010814m.g Setaria italica Si010814m.g I 0.691
TCM_026197 Theobroma cacao TCM_026197 I 0.691
Pm011057 Prunus mume Pm011057 I 0.691
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.689
30169.m006322 Ricinus communis 30169.m006322 I 0.689
Bo8g105490 Brassica oleracea Bo8g105490 I 0.688
Bra026720 Brassica rapa Bra026720 I 0.688
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.688
GLYMA15G41255 Glycine max GLYMA15G41255 I 0.688
Cla021845 Citrullus lanatus Cla021845 I 0.688
Bostr.7128s0256 Boechera stricta Bostr.7128s0256 I 0.688
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.688
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.688
Gorai.002G106300 Gossypium raimondii Gorai.002G106300 I 0.688
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.688
GRMZM2G097636 Zea mays GRMZM2G097636 I 0.686
GRMZM2G097638 Zea mays GRMZM2G097638 I 0.686
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.686
MTR_1g043080 Medicago truncatula MTR_1g043080 I 0.686
Ciclev10005102m.g Citrus clementina Ciclev10005102m.g I 0.686
orange1.1g045411m.g Citrus sinensis orange1.1g045411m.g I 0.686
Si017704m.g Setaria italica Si017704m.g I 0.685
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I 0.685
Eucgr.B02144 Eucalyptus grandis Eucgr.B02144 I 0.684
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.683
Bo6g081140 Brassica oleracea Bo6g081140 I 0.683
Bo6g122640 Brassica oleracea Bo6g122640 I 0.683
Bra003619 Brassica rapa Bra003619 I 0.683
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.683
GRMZM2G048295 Zea mays GRMZM2G048295 I 0.683
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.683
gene29961-v1.0-hybrid Fragaria vesca gene29961-v1.0-hybrid I 0.683
MDP0000215675 Malus domestica MDP0000215675 I 0.682
Pavir.J10932 Panicum virgatum Pavir.J10932 I 0.682
F775_18231 Aegilops tauschii F775_18231 I 0.681
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I 0.681
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I 0.681
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I 0.681
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I 0.681
TRIUR3_18702 Triticum urartu TRIUR3_18702 I 0.681
GRMZM5G833253 Zea mays GRMZM5G833253 I 0.680
MYB58 Arabidopsis thaliana AT1G16490 D 0.679
POPTR_0007s08190 Populus trichocarpa POPTR_0007s08190 I 0.679
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.679
MDP0000133542 Malus domestica MDP0000133542 I 0.678
MTR_1g043050 Medicago truncatula MTR_1g043050 I 0.677
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I 0.676
SapurV1A.0085s0540 Salix purpurea SapurV1A.0085s0540 I 0.676
PGSC0003DMG400038913 Solanum tuberosum PGSC0003DMG400038913 I 0.674
POPTR_0005s09930 Populus trichocarpa POPTR_0005s09930 I 0.674
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I 0.674
Carubv10020691m.g Capsella rubella Carubv10020691m.g I 0.674
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I 0.674
ATMYB72 Arabidopsis thaliana AT1G56160 I 0.673
F775_27569 Aegilops tauschii F775_27569 I 0.673
F775_32664 Aegilops tauschii F775_32664 I 0.673
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.673
MLOC_43806 Hordeum vulgare MLOC_43806 I 0.673
Traes_2DL_7183519F8 Triticum aestivum Traes_2DL_7183519F8 I 0.673
Traes_6DL_FCDEB9A8B Triticum aestivum Traes_6DL_FCDEB9A8B I 0.673
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.673
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.673
Thhalv10021926m.g Eutrema salsugineum Thhalv10021926m.g I 0.673
GLYMA03G41100 Glycine max GLYMA03G41100 I 0.672
GLYMA19G43740 Glycine max GLYMA19G43740 I 0.672
MLOC_53640 Hordeum vulgare MLOC_53640 I 0.672
PGSC0003DMG400017525 Solanum tuberosum PGSC0003DMG400017525 I 0.671
Bo5g007320 Brassica oleracea Bo5g007320 I 0.670
Bra015481 Brassica rapa Bra015481 I 0.670
PK08038.1 Cannabis sativa PK08038.1 I 0.670
Bo3g185830 Brassica oleracea Bo3g185830 I 0.667
Bra030812 Brassica rapa Bra030812 I 0.667
ATMYB72 Arabidopsis lyrata fgenesh2_kg.1__4638__AT1G56160.1 I 0.667
Cla013669 Citrullus lanatus Cla013669 I 0.667
Cucsa.118450 Cucumis sativus Cucsa.118450 I 0.667
Bostr.6758s0073 Boechera stricta Bostr.6758s0073 I 0.667
Thhalv10012163m.g Eutrema salsugineum Thhalv10012163m.g I 0.667
MTR_2g067420 Medicago truncatula MTR_2g067420 I 0.666
ONIVA04G17140 Oryza nivara ONIVA04G17140 I 0.666
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.666
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.666
Si010384m.g Setaria italica Si010384m.g I 0.666
Lus10031758.g Linum usitatissimum Lus10031758.g I 0.666
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.666
SapurV1A.0284s0110 Salix purpurea SapurV1A.0284s0110 I 0.666
ATMYB13 Arabidopsis thaliana AT1G06180 D 0.665
ATMYB13 Arabidopsis lyrata fgenesh2_kg.1__590__AT1G06180.1 I 0.665
chr1.CM0295.20.nd Lotus japonicus chr1.CM0295.20.nd I 0.665
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.664
MYB14 Arabidopsis thaliana AT2G31180 I 0.664
Bo4g176020 Brassica oleracea Bo4g176020 I 0.664
Bo4g176030 Brassica oleracea Bo4g176030 I 0.664
Bra018267 Brassica rapa Bra018267 I 0.664
MTR_7g115650 Medicago truncatula MTR_7g115650 I 0.664
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.664
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.664
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.663
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.663
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.662
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.662
Bo6g077600 Brassica oleracea Bo6g077600 I 0.662
Bra035097 Brassica rapa Bra035097 I 0.662
OBART04G23680 Oryza barthii OBART04G23680 I 0.662
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.662
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.662
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.662
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.662
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.662
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.662
OS04G0594100 Oryza sativa OS04G0594100 I 0.662
Bo3g025100 Brassica oleracea Bo3g025100 I 0.661
Cla019747 Citrullus lanatus Cla019747 I 0.661
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.661