CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SapurV1A.1378s0050
(
Salix purpurea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
SapurV1A.1378s0050
T289853_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.1378s0050.1.p
Myb
42
100
PQWGLRETKEFIGIRAELKEDFTVTKRNRTLWEMVSARMGEKGYRRTPEQCKCKWKNLA
SapurV1A.1378s0050.2.p
Myb
42
100
PQWGLRETKEFIGIRAELKEDFTVTKRNRTLWEMVSARMGEKGYRRTPEQCKCKWKNLA
Links
Other
Myb/SANT
family TFs
Other
Salix purpurea
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.1496s0030
Salix purpurea
SapurV1A.1496s0030
N
0.742
PK23483.1
Cannabis sativa
PK23483.1
N
0.709
POPTR_0001s01210
Populus trichocarpa
POPTR_0001s01210
N
0.700
Eucgr.E01205
Eucalyptus grandis
Eucgr.E01205
N
0.700
Bo3g032310
Brassica oleracea
Bo3g032310
N
0.697
Bra000046
Brassica rapa
Bra000046
N
0.697
Bra005127
Brassica rapa
Bra005127
N
0.697
GLYMA01G35370
Glycine max
GLYMA01G35370
N
0.688
POPTR_0003s10360
Populus trichocarpa
POPTR_0003s10360
N
0.682
MTR_5g026540
Medicago truncatula
MTR_5g026540
N
0.680
Ca_10636
Cicer arietinum
Ca_10636
N
0.680
chr2.CM0803.380.nc
Lotus japonicus
chr2.CM0803.380.nc
N
0.680
Ca_22200
Cicer arietinum
Ca_22200
N
0.665
Lus10004806.g
Linum usitatissimum
Lus10004806.g
N
0.665
Al_scaffold_0004_2382
Arabidopsis lyrata
Al_scaffold_0004_2382
N
0.663
GT-3B
Arabidopsis thaliana
AT2G38250
N
0.663
Bo4g029680
Brassica oleracea
Bo4g029680
N
0.663
Cagra.4190s0013
Capsella grandiflora
Cagra.4190s0013
N
0.663