Bra005127 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra005127 T267752_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra005127.1-P Myb 38 96

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo3g032310 Brassica oleracea Bo3g032310 N 0.909
Bra000046 Brassica rapa Bra000046 N 0.909
Bo4g029680 Brassica oleracea Bo4g029680 N 0.875
Al_scaffold_0004_2382 Arabidopsis lyrata Al_scaffold_0004_2382 N 0.863
GT-3B Arabidopsis thaliana AT2G38250 N 0.863
PK23483.1 Cannabis sativa PK23483.1 N 0.834
Cagra.4190s0013 Capsella grandiflora Cagra.4190s0013 N 0.824
Ca_22200 Cicer arietinum Ca_22200 N 0.821
gene13452-v1.0-hybrid Fragaria vesca gene13452-v1.0-hybrid N 0.775
SapurV1A.1496s0030 Salix purpurea SapurV1A.1496s0030 N 0.775
Bo9g186070 Brassica oleracea Bo9g186070 N 0.763
evm.TU.supercontig_11.127 Carica papaya evm.TU.supercontig_11.127 N 0.755
POPTR_0001s01210 Populus trichocarpa POPTR_0001s01210 N 0.741
Bra005688 Brassica rapa Bra005688 N 0.731
fgenesh2_kg.6__73__AT5G01380.1 Arabidopsis lyrata fgenesh2_kg.6__73__AT5G01380.1 N 0.731
Bostr.6251s0108 Boechera stricta Bostr.6251s0108 N 0.731
Cagra.4082s0018 Capsella grandiflora Cagra.4082s0018 N 0.731
Carubv10001432m.g Capsella rubella Carubv10001432m.g N 0.731
Thhalv10015815m.g Eutrema salsugineum Thhalv10015815m.g N 0.731
MTR_4g015680 Medicago truncatula MTR_4g015680 N 0.727
GLYMA01G35370 Glycine max GLYMA01G35370 N 0.725
MTR_5g026540 Medicago truncatula MTR_5g026540 N 0.725
PGSC0003DMG400030246 Solanum tuberosum PGSC0003DMG400030246 N 0.725
Solyc09g005560.2 Solanum lycopersicum Solyc09g005560.2 N 0.725
Ca_10636 Cicer arietinum Ca_10636 N 0.725
chr2.CM0803.380.nc Lotus japonicus chr2.CM0803.380.nc N 0.725
Lus10004806.g Linum usitatissimum Lus10004806.g N 0.724
POPTR_0003s10360 Populus trichocarpa POPTR_0003s10360 N 0.715
MDP0000269977 Malus domestica MDP0000269977 N 0.714
MDP0000296708 Malus domestica MDP0000296708 N 0.714
SapurV1A.1378s0050 Salix purpurea SapurV1A.1378s0050 N 0.697
Gorai.012G114700 Gossypium raimondii Gorai.012G114700 N 0.692
cassava39493.m1 Manihot esculenta cassava39493.m1 N 0.674
TCM_021682 Theobroma cacao TCM_021682 N 0.672
Ciclev10012342m.g Citrus clementina Ciclev10012342m.g N 0.672
Gorai.006G183000 Gossypium raimondii Gorai.006G183000 N 0.672
orange1.1g022743m.g Citrus sinensis orange1.1g022743m.g N 0.672
Bo3g001460 Brassica oleracea Bo3g001460 N 0.671