gene13452-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene13452-v1.0-hybrid T287302_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna13452.1-v1.0-hybrid Myb 62 120

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_11.127 Carica papaya evm.TU.supercontig_11.127 N 0.825
PK23483.1 Cannabis sativa PK23483.1 N 0.820
Bo9g186070 Brassica oleracea Bo9g186070 N 0.802
MTR_4g015680 Medicago truncatula MTR_4g015680 N 0.795
MDP0000269977 Malus domestica MDP0000269977 N 0.780
Cagra.4190s0013 Capsella grandiflora Cagra.4190s0013 N 0.780
MDP0000296708 Malus domestica MDP0000296708 N 0.780
Bra005127 Brassica rapa Bra005127 N 0.775
Bo3g032310 Brassica oleracea Bo3g032310 N 0.775
Bra000046 Brassica rapa Bra000046 N 0.775
Thhalv10015815m.g Eutrema salsugineum Thhalv10015815m.g N 0.770
Cagra.4082s0018 Capsella grandiflora Cagra.4082s0018 N 0.770
Carubv10001432m.g Capsella rubella Carubv10001432m.g N 0.770
fgenesh2_kg.6__73__AT5G01380.1 Arabidopsis lyrata fgenesh2_kg.6__73__AT5G01380.1 N 0.770
Bra005688 Brassica rapa Bra005688 N 0.770
Bostr.6251s0108 Boechera stricta Bostr.6251s0108 N 0.770
Ca_22200 Cicer arietinum Ca_22200 N 0.767
Al_scaffold_0004_2382 Arabidopsis lyrata Al_scaffold_0004_2382 N 0.741
GT-3B Arabidopsis thaliana AT2G38250 N 0.741
Bo4g029680 Brassica oleracea Bo4g029680 N 0.741
POPTR_0006s10240 Populus trichocarpa POPTR_0006s10240 N 0.735
SapurV1A.0001s0490 Salix purpurea SapurV1A.0001s0490 N 0.735
Solyc09g005560.2 Solanum lycopersicum Solyc09g005560.2 N 0.729
PGSC0003DMG400030246 Solanum tuberosum PGSC0003DMG400030246 N 0.729
cassava39493.m1 Manihot esculenta cassava39493.m1 N 0.724
SapurV1A.0541s0070 Salix purpurea SapurV1A.0541s0070 N 0.715
POPTR_0016s12470 Populus trichocarpa POPTR_0016s12470 N 0.715
Bo3g001460 Brassica oleracea Bo3g001460 N 0.710
Gorai.012G114700 Gossypium raimondii Gorai.012G114700 N 0.709
VIT_08s0105g00400 Vitis vinifera VIT_08s0105g00400 N 0.705
Ciclev10012342m.g Citrus clementina Ciclev10012342m.g N 0.689
TCM_021682 Theobroma cacao TCM_021682 N 0.689
orange1.1g022743m.g Citrus sinensis orange1.1g022743m.g N 0.689
Lus10004806.g Linum usitatissimum Lus10004806.g N 0.677
estExt_gwp_gw1.C_2850022 Physcomitrella patens estExt_gwp_gw1.C_2850022 N 0.674
SapurV1A.1496s0030 Salix purpurea SapurV1A.1496s0030 N 0.661