POPTR_0006s10240 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0006s10240 T278300_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s10240.1 Myb 32 90

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0001s0490 Salix purpurea SapurV1A.0001s0490 N 0.901
POPTR_0016s12470 Populus trichocarpa POPTR_0016s12470 N 0.863
SapurV1A.0541s0070 Salix purpurea SapurV1A.0541s0070 N 0.863
cassava39493.m1 Manihot esculenta cassava39493.m1 N 0.782
MTR_4g015680 Medicago truncatula MTR_4g015680 N 0.764
evm.TU.supercontig_11.127 Carica papaya evm.TU.supercontig_11.127 N 0.759
VIT_08s0105g00400 Vitis vinifera VIT_08s0105g00400 N 0.743
TCM_021682 Theobroma cacao TCM_021682 N 0.739
Ca_22200 Cicer arietinum Ca_22200 N 0.736
Lus10004806.g Linum usitatissimum Lus10004806.g N 0.736
gene13452-v1.0-hybrid Fragaria vesca gene13452-v1.0-hybrid N 0.735
Ciclev10012342m.g Citrus clementina Ciclev10012342m.g N 0.705
orange1.1g022743m.g Citrus sinensis orange1.1g022743m.g N 0.705
PK23483.1 Cannabis sativa PK23483.1 N 0.705
Bra005688 Brassica rapa Bra005688 N 0.703
fgenesh2_kg.6__73__AT5G01380.1 Arabidopsis lyrata fgenesh2_kg.6__73__AT5G01380.1 N 0.703
Bostr.6251s0108 Boechera stricta Bostr.6251s0108 N 0.703
Cagra.4082s0018 Capsella grandiflora Cagra.4082s0018 N 0.703
Carubv10001432m.g Capsella rubella Carubv10001432m.g N 0.703
Thhalv10015815m.g Eutrema salsugineum Thhalv10015815m.g N 0.703
Gorai.006G183000 Gossypium raimondii Gorai.006G183000 N 0.692
MDP0000269977 Malus domestica MDP0000269977 N 0.691
MDP0000296708 Malus domestica MDP0000296708 N 0.691
Cagra.4190s0013 Capsella grandiflora Cagra.4190s0013 N 0.687
estExt_gwp_gw1.C_2850022 Physcomitrella patens estExt_gwp_gw1.C_2850022 N 0.686
PGSC0003DMG400030246 Solanum tuberosum PGSC0003DMG400030246 N 0.670
Solyc09g005560.2 Solanum lycopersicum Solyc09g005560.2 N 0.670
Bo9g186070 Brassica oleracea Bo9g186070 N 0.667