CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1301376g001
(
Phoenix dactylifera
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PDK_20s1301376g001
T291079_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G20400
M07046_2.00
Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB
VGAATATKCYWTDNNNHHHBNNDNHNNHN
Dap-seq
OMalley et al.(2016)
AT2G20400_col_a
0.704
0.787
AT2G20400
M07047_2.00
Arabidopsis thaliana
RDRGAATATTCBNWD
HWNVGAATATTCYHY
Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a
0.704
0.787
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.681
0.787
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.663
0.787
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1301376g001
Myb
94
145
RIRWTHELHEQFVEAVNHLGGAMKATPKGILALMKSQGLTIFHIKSHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Phoenix dactylifera
TFs
151 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000159434
Malus domestica
MDP0000159434
I
0.746
MDP0000132340
Malus domestica
MDP0000132340
I
0.741
chr1.CM0600.200.nd
Lotus japonicus
chr1.CM0600.200.nd
I
0.723
GLYMA03G41040
Glycine max
GLYMA03G41040
I
0.723
AT2G20400
Arabidopsis thaliana
AT2G20400
D
0.704
OGLUM02G03100
Oryza glumaepatula
OGLUM02G03100
I
0.702
OBART02G03200
Oryza barthii
OBART02G03200
I
0.702
OB02G12880
Oryza brachyantha
OB02G12880
I
0.702
OMERI02G03860
Oryza meridionalis
OMERI02G03860
I
0.702
ORGLA02G0030200
Oryza glaberrima
ORGLA02G0030200
I
0.702
PHR3
Oryza sativa
OS02G0139000
I
0.702
ORUFI02G03130
Oryza rufipogon
ORUFI02G03130
I
0.702
OPUNC02G02530
Oryza punctata
OPUNC02G02530
I
0.702
ONIVA02G03010
Oryza nivara
ONIVA02G03010
I
0.702
PHR3
Oryza indica
BGIOSGA007162
I
0.702
Lus10022885.g
Linum usitatissimum
Lus10022885.g
I
0.696
estExt_fgenesh1_pg.C_4900005
Physcomitrella patens
estExt_fgenesh1_pg.C_4900005
I
0.692
POPTR_0002s25960
Populus trichocarpa
POPTR_0002s25960
I
0.685
LPERR02G03030
Leersia perrieri
LPERR02G03030
I
0.684
Cagra.8766s0002
Capsella grandiflora
Cagra.8766s0002
I
0.682
Carubv10013614m.g
Capsella rubella
Carubv10013614m.g
I
0.682
Lus10024938.g
Linum usitatissimum
Lus10024938.g
I
0.681
Lus10022886.g
Linum usitatissimum
Lus10022886.g
I
0.681
PRUPE_ppa005708mg
Prunus persica
PRUPE_ppa005708mg
I
0.681
OS06G0703900
Oryza sativa
OS06G0703900
I
0.681
Sb01g036440
Sorghum bicolor
Sb01g036440
I
0.681
Gorai.007G149100
Gossypium raimondii
Gorai.007G149100
I
0.681
AMTR_s00142p00049490
Amborella trichopoda
AMTR_s00142p00049490
I
0.681
OPUNC03G15590
Oryza punctata
OPUNC03G15590
I
0.681
LjSGA_026114.1
Lotus japonicus
LjSGA_026114.1
I
0.681
MDP0000285150
Malus domestica
MDP0000285150
I
0.681
BGIOSGA023563
Oryza indica
BGIOSGA023563
I
0.681
ORGLA06G0222600
Oryza glaberrima
ORGLA06G0222600
I
0.681
Si006354m.g
Setaria italica
Si006354m.g
I
0.681
PHR1
Oryza indica
BGIOSGA012553
I
0.681
PHR1
Oryza sativa
OS03G0329900
D
0.681
Solyc06g008200.2
Solanum lycopersicum
Solyc06g008200.2
I
0.681
Pm003600
Prunus mume
Pm003600
I
0.681
Ca_12255
Cicer arietinum
Ca_12255
I
0.681
Ca_03781
Cicer arietinum
Ca_03781
I
0.681
29637.m000753
Ricinus communis
29637.m000753
I
0.681
cassava37547.valid.m1
Manihot esculenta
cassava37547.valid.m1
I
0.681
Aquca_017_00793
Aquilegia coerulea
Aquca_017_00793
I
0.681
Ciclev10019956m.g
Citrus clementina
Ciclev10019956m.g
I
0.681
Eucgr.A01323
Eucalyptus grandis
Eucgr.A01323
I
0.681
VIT_07s0005g04120
Vitis vinifera
VIT_07s0005g04120
I
0.681
TRIUR3_32904
Triticum urartu
TRIUR3_32904
I
0.681
evm.TU.supercontig_87.3
Carica papaya
evm.TU.supercontig_87.3
I
0.681
ONIVA03G17050
Oryza nivara
ONIVA03G17050
I
0.681
Si035682m.g
Setaria italica
Si035682m.g
I
0.681
TCM_003939
Theobroma cacao
TCM_003939
I
0.681
TCM_026171
Theobroma cacao
TCM_026171
I
0.681
Traes_7DL_090D0E08E
Triticum aestivum
Traes_7DL_090D0E08E
I
0.681
Traes_7BL_09DD5A1DC
Triticum aestivum
Traes_7BL_09DD5A1DC
I
0.681
Traes_7AL_D45376F32
Triticum aestivum
Traes_7AL_D45376F32
I
0.681
Si017191m.g
Setaria italica
Si017191m.g
I
0.681
ORGLA03G0154000
Oryza glaberrima
ORGLA03G0154000
I
0.681
Pavir.J14911
Panicum virgatum
Pavir.J14911
I
0.681
Pavir.J39104
Panicum virgatum
Pavir.J39104
I
0.681
GRMZM2G010920
Zea mays
GRMZM2G010920
I
0.681
MDP0000321461
Malus domestica
MDP0000321461
I
0.681
GSMUA_Achr8G12580_001
Musa acuminata
GSMUA_Achr8G12580_001
I
0.681
Pavir.Db00228
Panicum virgatum
Pavir.Db00228
I
0.681
LPERR03G14050
Leersia perrieri
LPERR03G14050
I
0.681
Pavir.Ia03429
Panicum virgatum
Pavir.Ia03429
I
0.681
GRMZM2G006477
Zea mays
GRMZM2G006477
I
0.681
GLYMA19G43690
Glycine max
GLYMA19G43690
I
0.681
SapurV1A.0252s0390
Salix purpurea
SapurV1A.0252s0390
I
0.681
F775_29452
Aegilops tauschii
F775_29452
I
0.681
PK01035.1
Cannabis sativa
PK01035.1
I
0.681
GLYMA03G32350
Glycine max
GLYMA03G32350
I
0.681
BRADI1G34470
Brachypodium distachyon
BRADI1G34470
I
0.681
GLYMA19G35080
Glycine max
GLYMA19G35080
I
0.681
GLYMA13G18805
Glycine max
GLYMA13G18805
I
0.681
GLYMA10G04540
Glycine max
GLYMA10G04540
I
0.681
MLOC_54829
Hordeum vulgare
MLOC_54829
I
0.681
GSMUA_Achr5G12960_001
Musa acuminata
GSMUA_Achr5G12960_001
I
0.681
OB06G34350
Oryza brachyantha
OB06G34350
I
0.681
OLONG_005622
Oryza longistaminata
OLONG_005622
I
0.681
Pavir.Aa03223
Panicum virgatum
Pavir.Aa03223
I
0.681
chr1.CM0295.930.nd
Lotus japonicus
chr1.CM0295.930.nd
I
0.681
PK16227.1
Cannabis sativa
PK16227.1
I
0.681
OB03G25800
Oryza brachyantha
OB03G25800
I
0.681
orange1.1g011805m.g
Citrus sinensis
orange1.1g011805m.g
I
0.681
MTR_1g080330
Medicago truncatula
MTR_1g080330
I
0.681
OMERI03G14370
Oryza meridionalis
OMERI03G14370
I
0.681
MTR_7g098250
Medicago truncatula
MTR_7g098250
I
0.681
PK01823.1
Cannabis sativa
PK01823.1
I
0.678
mgf017208m
Mimulus guttatus
mgf017208m
N
0.678
estExt_fgenesh2_pg.C_1120045
Physcomitrella patens
estExt_fgenesh2_pg.C_1120045
I
0.676
Eucgr.A02444
Eucalyptus grandis
Eucgr.A02444
N
0.676
F775_05042
Aegilops tauschii
F775_05042
I
0.675
MLOC_5837
Hordeum vulgare
MLOC_5837
I
0.675
Traes_6AS_DBE4E3146
Triticum aestivum
Traes_6AS_DBE4E3146
I
0.675
Traes_6DS_20D189350
Triticum aestivum
Traes_6DS_20D189350
I
0.675
Traes_6BS_00D311B94
Triticum aestivum
Traes_6BS_00D311B94
I
0.675
Sb10g029200
Sorghum bicolor
Sb10g029200
I
0.675
BRADI4G27620
Brachypodium distachyon
BRADI4G27620
I
0.673
F775_09661
Aegilops tauschii
F775_09661
I
0.673
Eucgr.E04232
Eucalyptus grandis
Eucgr.E04232
I
0.673
MLOC_60074
Hordeum vulgare
MLOC_60074
I
0.673
Traes_5AL_6F77CFB03
Triticum aestivum
Traes_5AL_6F77CFB03
I
0.673
Traes_5BL_A2C97A02D
Triticum aestivum
Traes_5BL_A2C97A02D
I
0.673
TRIUR3_29870
Triticum urartu
TRIUR3_29870
I
0.673
Traes_5DL_EB47672ED
Triticum aestivum
Traes_5DL_EB47672ED
I
0.673
Bra036123
Brassica rapa
Bra036123
I
0.671
Bo9g010090
Brassica oleracea
Bo9g010090
I
0.671
Pavir.Bb01566
Panicum virgatum
Pavir.Bb01566
I
0.670
gene08317-v1.0-hybrid
Fragaria vesca
gene08317-v1.0-hybrid
I
0.670
Pavir.Ba02554
Panicum virgatum
Pavir.Ba02554
I
0.670
PDK_20s1306081g005
Phoenix dactylifera
PDK_20s1306081g005
I
0.670
MDP0000248927
Malus domestica
MDP0000248927
I
0.670
Sb02g010520
Sorghum bicolor
Sb02g010520
I
0.670
OBART07G12530
Oryza barthii
OBART07G12530
I
0.670
OB07G18720
Oryza brachyantha
OB07G18720
I
0.670
OGLUM07G11980
Oryza glumaepatula
OGLUM07G11980
I
0.670
OLONG_021629
Oryza longistaminata
OLONG_021629
I
0.670
OPUNC07G11150
Oryza punctata
OPUNC07G11150
I
0.670
ONIVA07G10340
Oryza nivara
ONIVA07G10340
I
0.670
LPERR07G10540
Leersia perrieri
LPERR07G10540
I
0.670
GSMUA_Achr11G02560_001
Musa acuminata
GSMUA_Achr11G02560_001
I
0.670
BRADI1G28920
Brachypodium distachyon
BRADI1G28920
I
0.670
PHR2
Oryza indica
BGIOSGA025605
I
0.670
BRADI1G63530
Brachypodium distachyon
BRADI1G63530
I
0.670
F775_09823
Aegilops tauschii
F775_09823
I
0.670
GRMZM2G162409
Zea mays
GRMZM2G162409
I
0.670
ORGLA07G0105500
Oryza glaberrima
ORGLA07G0105500
I
0.670
OMERI07G09960
Oryza meridionalis
OMERI07G09960
I
0.670
Traes_3AS_6EEB8D2B2
Triticum aestivum
Traes_3AS_6EEB8D2B2
I
0.670
ORUFI07G12650
Oryza rufipogon
ORUFI07G12650
I
0.670
TRAES3BF104900050CFD_g
Triticum aestivum
TRAES3BF104900050CFD_g
I
0.670
AMTR_s00131p00063460
Amborella trichopoda
AMTR_s00131p00063460
I
0.670
Si029945m.g
Setaria italica
Si029945m.g
I
0.670
PHR2
Oryza sativa
OS07G0438800
I
0.670
PRUPE_ppa004886mg
Prunus persica
PRUPE_ppa004886mg
I
0.670
estExt_fgenesh1_pg.C_600033
Physcomitrella patens
estExt_fgenesh1_pg.C_600033
I
0.667
mgf005047m
Mimulus guttatus
mgf005047m
I
0.663
PHR1
Arabidopsis thaliana
AT4G28610
D
0.663
Bostr.7867s0704
Boechera stricta
Bostr.7867s0704
I
0.663
Bo8g054450
Brassica oleracea
Bo8g054450
I
0.663
Thhalv10025330m.g
Eutrema salsugineum
Thhalv10025330m.g
I
0.663
Bra010355
Brassica rapa
Bra010355
I
0.663
Bostr.7903s0128
Boechera stricta
Bostr.7903s0128
I
0.663
Pavir.J27649
Panicum virgatum
Pavir.J27649
I
0.663
scaffold_304362.1
Arabidopsis lyrata
scaffold_304362.1
I
0.663
Cagra.1225s0029
Capsella grandiflora
Cagra.1225s0029
I
0.663
gene16679-v1.0-hybrid
Fragaria vesca
gene16679-v1.0-hybrid
I
0.663
Solyc09g072830.2
Solanum lycopersicum
Solyc09g072830.2
I
0.663
Thhalv10002005m.g
Eutrema salsugineum
Thhalv10002005m.g
I
0.663
PHR1
Arabidopsis lyrata
fgenesh2_kg.7__1335__AT4G28610.1
I
0.663
LPERR02G30520
Leersia perrieri
LPERR02G30520
I
0.662