Bo5g002960 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo5g002960 T292401_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC004
M07161_2.00 		Arabidopsis thaliana
CTTVYNYNRYAAGY
RCTTRYNRNRBAAG		 Dap-seq
OMalley et al.(2016)
ANAC004_col_a 		0.875 0.593
NAC004
M07162_2.00 		Arabidopsis thaliana
WVCTTVYNBNRYAAGYWWBNN
NNVWWRCTTRYNVNRBAAGBW		 Dap-seq
OMalley et al.(2016)
ANAC004_colamp_a 		0.875 0.593
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g002960.1 NAC/NAM 4 133

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo5g002950 Brassica oleracea Bo5g002950 I 0.937
Bra033306 Brassica rapa Bra033306 I 0.935
Cagra.1968s0040 Capsella grandiflora Cagra.1968s0040 I 0.924
Carubv10009727m.g Capsella rubella Carubv10009727m.g I 0.924
Bostr.5325s0006 Boechera stricta Bostr.5325s0006 I 0.915
Bra033308 Brassica rapa Bra033308 I 0.912
Bra033303 Brassica rapa Bra033303 I 0.904
Bostr.5325s0016 Boechera stricta Bostr.5325s0016 I 0.895
Bostr.5325s0017 Boechera stricta Bostr.5325s0017 I 0.882
NAC004 Arabidopsis thaliana AT1G02230 D 0.875