CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0002s18280
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0002s18280
T295224_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0002s18280.1
NAC/NAM
3
134
PVGYRFHPTEEEIICYYLKHKMNGRNSLVDDHIGEVDLYRRDPWELPVSARKKSDDRVWYYFCRLDYKHSNSKRASRETKNGFWKSTGKVRDIKAKRTNEVIGSKRTLVFQYRCPDSKKVVGTSWVIHEFHA
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0003s0330
Salix purpurea
SapurV1A.0003s0330
I
0.919
Lus10030175.g
Linum usitatissimum
Lus10030175.g
N
0.909
Lus10005143.g
Linum usitatissimum
Lus10005143.g
N
0.909
SapurV1A.0162s0440
Salix purpurea
SapurV1A.0162s0440
N
0.899
gene23394-v1.0-hybrid
Fragaria vesca
gene23394-v1.0-hybrid
N
0.882
VIT_15s0048g02320
Vitis vinifera
VIT_15s0048g02320
I
0.871