CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10005143.g
(
Linum usitatissimum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Lus10005143.g
T298210_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10005143
NAC/NAM
5
139
SVGYRFHPTDEELIAHYLKLKMNGHDSLVDKVIPEVDVYRLEPSDLPNYSVVGSSSDDQVWYFYCRLDYKYKNSKRANRATESGFWKVTGKPRFIVARDSGEQIGVKKTLVFFYKARSGDAKPVSTDWVIHQYQA
Links
Other
NAC/NAM
family TFs
Other
Linum usitatissimum
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10030175.g
Linum usitatissimum
Lus10030175.g
N
0.995
MDP0000206868
Malus domestica
MDP0000206868
I
0.925
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.916
MDP0000882033
Malus domestica
MDP0000882033
N
0.915
POPTR_0002s18280
Populus trichocarpa
POPTR_0002s18280
N
0.909
SapurV1A.0586s0170
Salix purpurea
SapurV1A.0586s0170
I
0.906
SapurV1A.0321s0340
Salix purpurea
SapurV1A.0321s0340
I
0.904
SapurV1A.0321s0360
Salix purpurea
SapurV1A.0321s0360
I
0.904
POPTR_0014s10350
Populus trichocarpa
POPTR_0014s10350
I
0.901
POPTR_0014s10360
Populus trichocarpa
POPTR_0014s10360
I
0.901
Bo5g002860
Brassica oleracea
Bo5g002860
N
0.900
POPTR_0014s10330
Populus trichocarpa
POPTR_0014s10330
I
0.899
SapurV1A.0003s0330
Salix purpurea
SapurV1A.0003s0330
I
0.899
cassava39379.m1
Manihot esculenta
cassava39379.m1
N
0.897
SapurV1A.0321s0350
Salix purpurea
SapurV1A.0321s0350
I
0.896
POPTR_0002s18290
Populus trichocarpa
POPTR_0002s18290
I
0.895
POPTR_0014s07210
Populus trichocarpa
POPTR_0014s07210
I
0.895
SapurV1A.0162s0450
Salix purpurea
SapurV1A.0162s0450
I
0.894
POPTR_0002s15560
Populus trichocarpa
POPTR_0002s15560
I
0.893
Bra033296
Brassica rapa
Bra033296
I
0.890
SapurV1A.3648s0010
Salix purpurea
SapurV1A.3648s0010
N
0.890
MDP0000575835
Malus domestica
MDP0000575835
I
0.882
POPTR_0002s18310
Populus trichocarpa
POPTR_0002s18310
I
0.880
VIT_15s0048g02320
Vitis vinifera
VIT_15s0048g02320
I
0.880
MDP0000214515
Malus domestica
MDP0000214515
I
0.872
F775_13961
Aegilops tauschii
F775_13961
I
0.871
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.871