CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm028250
(
Prunus mume
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pm028250
T296700_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm028250
NAC/NAM
11
142
PVGYTFRPSDDQLLEHYLLKKNSGEPLQYENVIPEMDLYGKIEPWDIWHECGGHKLAKGEDLYFFTKLKSLGDKDTRVARTIGSGTWKGENSGTTVSDPNNKEKDLGIWKRFHYENPKSVQDGCWIMHEYSL
Links
Other
NAC/NAM
family TFs
Other
Prunus mume
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa019675mg
Prunus persica
PRUPE_ppa019675mg
N
0.989
PRUPE_ppa027019mg
Prunus persica
PRUPE_ppa027019mg
N
0.989
Pm012091
Prunus mume
Pm012091
N
0.989
Pm031134
Prunus mume
Pm031134
N
0.989
Pm011994
Prunus mume
Pm011994
N
0.988
PRUPE_ppa023804mg
Prunus persica
PRUPE_ppa023804mg
N
0.981
PRUPE_ppa025596mg
Prunus persica
PRUPE_ppa025596mg
N
0.981
PRUPE_ppa015761mg
Prunus persica
PRUPE_ppa015761mg
N
0.972
Pm003866
Prunus mume
Pm003866
N
0.967
PRUPE_ppa025721mg
Prunus persica
PRUPE_ppa025721mg
N
0.961
Pm013492
Prunus mume
Pm013492
N
0.950
MDP0000285555
Malus domestica
MDP0000285555
I
0.938
MDP0000206868
Malus domestica
MDP0000206868
I
0.932
MDP0000882033
Malus domestica
MDP0000882033
N
0.931