Lus10004338.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10004338.g T298207_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.882 0.802
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.882 0.802
NAC105
M00980_2.00 		Arabidopsis thaliana
NYWHKNHWNN
NNWDNMDWRN		 PBM
Lindemose et al.(2014)
VND3 		0.875 0.752
NAC105
M07245_2.00 		Arabidopsis thaliana
NTTGCTTVNNNHNYAMG
CKTRNDNNNBAAGCAAN		 Dap-seq
OMalley et al.(2016)
VND3_colamp_a 		0.875 0.752
NAC105
M07246_2.00 		Arabidopsis thaliana
TTGCTTVHNNHNYAMG
CKTRNDNNDBAAGCAA		 Dap-seq
OMalley et al.(2016)
VND3_col 		0.875 0.752
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10004338 NAC/NAM 8 134

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10024601.g Linum usitatissimum Lus10024601.g I 0.933
SapurV1A.0634s0120 Salix purpurea SapurV1A.0634s0120 I 0.933
cassava46384.m1 Manihot esculenta cassava46384.m1 I 0.932
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.930
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.930
TCM_016035 Theobroma cacao TCM_016035 I 0.930
28200.m000189 Ricinus communis 28200.m000189 I 0.930
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.930
MTR_4g036030 Medicago truncatula MTR_4g036030 I 0.929
PGSC0003DMG400004740 Solanum tuberosum PGSC0003DMG400004740 I 0.929
Solyc08g079120.1 Solanum lycopersicum Solyc08g079120.1 I 0.929
LjSGA_013013.1 Lotus japonicus LjSGA_013013.1 I 0.929
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I 0.926
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.922
GLYMA05G04250 Glycine max GLYMA05G04250 I 0.920
GLYMA17G14700 Glycine max GLYMA17G14700 I 0.920
GLYMA02G05620 Glycine max GLYMA02G05620 I 0.919
PRUPE_ppa015786mg Prunus persica PRUPE_ppa015786mg I 0.919
Pm023559 Prunus mume Pm023559 I 0.919
PK23416.1 Cannabis sativa PK23416.1 I 0.919
TCM_014939 Theobroma cacao TCM_014939 I 0.917
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I 0.917
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I 0.917
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I 0.917
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I 0.917
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I 0.916
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I 0.916
Ciclev10024218m.g Citrus clementina Ciclev10024218m.g I 0.916
orange1.1g020354m.g Citrus sinensis orange1.1g020354m.g I 0.916
GLYMA16G24200 Glycine max GLYMA16G24200 I 0.915
mgf021916m Mimulus guttatus mgf021916m I 0.914
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I 0.913
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I 0.913
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I 0.913
Pm019488 Prunus mume Pm019488 I 0.913
Pm019490 Prunus mume Pm019490 I 0.913
30147.m014211 Ricinus communis 30147.m014211 I 0.913
Cucsa.302120 Cucumis sativus Cucsa.302120 I 0.913
MDP0000226701 Malus domestica MDP0000226701 I 0.913
Cla006372 Citrullus lanatus Cla006372 I 0.912
Cucsa.251620 Cucumis sativus Cucsa.251620 I 0.912
mgf020336m Mimulus guttatus mgf020336m I 0.912
evm.TU.supercontig_29.118 Carica papaya evm.TU.supercontig_29.118 I 0.912
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I 0.912
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I 0.911
POPTR_0007s13910 Populus trichocarpa POPTR_0007s13910 I 0.910
cassava47039.m1 Manihot esculenta cassava47039.m1 I 0.910
Gorai.003G169000 Gossypium raimondii Gorai.003G169000 I 0.910
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I 0.909
gene32254-v1.0-hybrid Fragaria vesca gene32254-v1.0-hybrid I 0.908
GLYMA12G00760 Glycine max GLYMA12G00760 I 0.907
SELMODRAFT_451784 Selaginella moellendorffii SELMODRAFT_451784 I 0.907
SELMODRAFT_57388 Selaginella moellendorffii SELMODRAFT_57388 I 0.907
Gorai.004G201100 Gossypium raimondii Gorai.004G201100 I 0.907
SapurV1A.0129s0210 Salix purpurea SapurV1A.0129s0210 I 0.907
SELMODRAFT_89986 Selaginella moellendorffii SELMODRAFT_89986 I 0.903
SELMODRAFT_93824 Selaginella moellendorffii SELMODRAFT_93824 I 0.903
Gorai.008G236400 Gossypium raimondii Gorai.008G236400 I 0.901
Gorai.007G048000 Gossypium raimondii Gorai.007G048000 I 0.900
PK28510.1 Cannabis sativa PK28510.1 I 0.900
MTR_5g021710 Medicago truncatula MTR_5g021710 I 0.899
Solyc03g083880.2 Solanum lycopersicum Solyc03g083880.2 I 0.899
MTR_4g101680 Medicago truncatula MTR_4g101680 I 0.898
Ca_02365 Cicer arietinum Ca_02365 I 0.897
GLYMA01G37310 Glycine max GLYMA01G37310 I 0.895
GLYMA11G07990 Glycine max GLYMA11G07990 I 0.895
Ca_01981 Cicer arietinum Ca_01981 I 0.895
GSMUA_Achr11G17510_001 Musa acuminata GSMUA_Achr11G17510_001 I 0.894
MTR_5g012080 Medicago truncatula MTR_5g012080 I 0.893
Cucsa.320590 Cucumis sativus Cucsa.320590 I 0.893
GLYMA09G36600 Glycine max GLYMA09G36600 I 0.892
Cagra.1670s0031 Capsella grandiflora Cagra.1670s0031 I 0.892
Carubv10022351m.g Capsella rubella Carubv10022351m.g I 0.892
Lus10031142.g Linum usitatissimum Lus10031142.g I 0.892
Lus10031721.g Linum usitatissimum Lus10031721.g I 0.892
MDP0000320566 Malus domestica MDP0000320566 I 0.892
AMTR_s00011p00251570 Amborella trichopoda AMTR_s00011p00251570 I 0.891
Bo7g065010 Brassica oleracea Bo7g065010 I 0.890
Bra012065 Brassica rapa Bra012065 I 0.890
ANAC105 Arabidopsis lyrata fgenesh2_kg.8__2792__AT5G66300.1 I 0.890
GLYMA06G47680 Glycine max GLYMA06G47680 I 0.890
SELMODRAFT_402243 Selaginella moellendorffii SELMODRAFT_402243 I 0.890
SELMODRAFT_408624 Selaginella moellendorffii SELMODRAFT_408624 I 0.890
Bostr.0568s0042 Boechera stricta Bostr.0568s0042 I 0.890
Cagra.10427s0040 Capsella grandiflora Cagra.10427s0040 I 0.890
Carubv10026898m.g Capsella rubella Carubv10026898m.g I 0.890
GSMUA_Achr8G11590_001 Musa acuminata GSMUA_Achr8G11590_001 I 0.889
evm.TU.supercontig_3.311 Carica papaya evm.TU.supercontig_3.311 I 0.889
Bostr.22157s0066 Boechera stricta Bostr.22157s0066 I 0.887
VND5 Arabidopsis lyrata fgenesh2_kg.2__212__AT1G62700.1 I 0.886
Bostr.18351s0273 Boechera stricta Bostr.18351s0273 I 0.886
GLYMA04G13660 Glycine max GLYMA04G13660 I 0.884
GLYMA11G03340 Glycine max GLYMA11G03340 I 0.883
NAC007 Arabidopsis thaliana AT1G12260 D 0.882
Bo8g062650 Brassica oleracea Bo8g062650 I 0.882
Bra016783 Brassica rapa Bra016783 I 0.882
VND4 Arabidopsis lyrata fgenesh2_kg.1__1330__AT1G12260.1 I 0.882
Bostr.13671s0233 Boechera stricta Bostr.13671s0233 I 0.882
Cagra.0568s0135 Capsella grandiflora Cagra.0568s0135 I 0.882
Carubv10009366m.g Capsella rubella Carubv10009366m.g I 0.882
Thhalv10007823m.g Eutrema salsugineum Thhalv10007823m.g I 0.882
LjSGA_069569.1 Lotus japonicus LjSGA_069569.1 I 0.882
PRUPE_ppa022264mg Prunus persica PRUPE_ppa022264mg I 0.881
Pm026735 Prunus mume Pm026735 I 0.881
MDP0000136180 Malus domestica MDP0000136180 I 0.881
MDP0000176447 Malus domestica MDP0000176447 I 0.881
MDP0000298965 Malus domestica MDP0000298965 I 0.881
MDP0000299959 Malus domestica MDP0000299959 I 0.881
SapurV1A.0166s0460 Salix purpurea SapurV1A.0166s0460 I 0.881
SapurV1A.3982s0010 Salix purpurea SapurV1A.3982s0010 I 0.881
Thhalv10005380m.g Eutrema salsugineum Thhalv10005380m.g I 0.880
Cla005768 Citrullus lanatus Cla005768 I 0.878
MTR_8g076110 Medicago truncatula MTR_8g076110 N 0.877
Ca_08693 Cicer arietinum Ca_08693 I 0.877
Aquca_007_00369 Aquilegia coerulea Aquca_007_00369 I 0.877
gene14869-v1.0-hybrid Fragaria vesca gene14869-v1.0-hybrid I 0.876
NAC105 Arabidopsis thaliana AT5G66300 D 0.875
GRMZM2G354151 Zea mays GRMZM2G354151 I 0.875
Bo8g108300 Brassica oleracea Bo8g108300 I 0.873
Bra026981 Brassica rapa Bra026981 I 0.873
Gorai.003G010700 Gossypium raimondii Gorai.003G010700 I 0.871