CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10005380m.g
(
Eutrema salsugineum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Thhalv10005380m.g
T299213_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC105
M00980_2.00
Arabidopsis thaliana
NYWHKNHWNN
NNWDNMDWRN
PBM
Lindemose et al.(2014)
VND3
0.934
0.939
NAC105
M07245_2.00
Arabidopsis thaliana
NTTGCTTVNNNHNYAMG
CKTRNDNNNBAAGCAAN
Dap-seq
OMalley et al.(2016)
VND3_colamp_a
0.934
0.939
NAC105
M07246_2.00
Arabidopsis thaliana
TTGCTTVHNNHNYAMG
CKTRNDNNDBAAGCAA
Dap-seq
OMalley et al.(2016)
VND3_col
0.934
0.939
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.912
0.851
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.904
0.851
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.904
0.851
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10005380m
NAC/NAM
12
138
PPGFRFHPTDEELVGYYLKKKVASQKIDLDVIREIDLYKIEPWDLQERCKIGYEQKEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAVYLNSKLIGMRKTLVFYRGRAPNGQKSDWIIHEYYS
Links
Other
NAC/NAM
family TFs
Other
Eutrema salsugineum
TFs
245 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANAC105
Arabidopsis lyrata
fgenesh2_kg.8__2792__AT5G66300.1
I
0.949
Bostr.0568s0042
Boechera stricta
Bostr.0568s0042
I
0.949
Cagra.10427s0040
Capsella grandiflora
Cagra.10427s0040
I
0.949
Carubv10026898m.g
Capsella rubella
Carubv10026898m.g
I
0.949
Bo7g065010
Brassica oleracea
Bo7g065010
I
0.948
Bra012065
Brassica rapa
Bra012065
I
0.948
GLYMA01G37310
Glycine max
GLYMA01G37310
I
0.941
GLYMA11G07990
Glycine max
GLYMA11G07990
I
0.941
Ca_01981
Cicer arietinum
Ca_01981
I
0.941
SELMODRAFT_451784
Selaginella moellendorffii
SELMODRAFT_451784
I
0.939
SELMODRAFT_57388
Selaginella moellendorffii
SELMODRAFT_57388
I
0.939
Gorai.007G048000
Gossypium raimondii
Gorai.007G048000
I
0.939
MTR_5g021710
Medicago truncatula
MTR_5g021710
I
0.938
NAC105
Arabidopsis thaliana
AT5G66300
D
0.934
POPTR_0007s13910
Populus trichocarpa
POPTR_0007s13910
I
0.931
Aquca_007_00369
Aquilegia coerulea
Aquca_007_00369
I
0.930
Eucgr.I02366
Eucalyptus grandis
Eucgr.I02366
I
0.925
Bra039915
Brassica rapa
Bra039915
I
0.924
GSMUA_Achr11G03040_001
Musa acuminata
GSMUA_Achr11G03040_001
I
0.922
GSMUA_Achr8G12100_001
Musa acuminata
GSMUA_Achr8G12100_001
I
0.922
OGLUM08G00350
Oryza glumaepatula
OGLUM08G00350
N
0.922
ORUFI08G00330
Oryza rufipogon
ORUFI08G00330
N
0.922
GLYMA16G24200
Glycine max
GLYMA16G24200
I
0.921
OB08G10370
Oryza brachyantha
OB08G10370
N
0.921
OPUNC08G00360
Oryza punctata
OPUNC08G00360
N
0.921
OS08G0103900
Oryza sativa
OS08G0103900
N
0.921
POPTR_0005s11870
Populus trichocarpa
POPTR_0005s11870
I
0.921
TCM_000235
Theobroma cacao
TCM_000235
I
0.921
ANAC076
Vitis vinifera
VIT_04s0023g03110
I
0.921
cassava24947.valid.m1
Manihot esculenta
cassava24947.valid.m1
I
0.921
Ciclev10026114m.g
Citrus clementina
Ciclev10026114m.g
I
0.921
evm.TU.supercontig_6.226
Carica papaya
evm.TU.supercontig_6.226
I
0.921
Gorai.007G196400
Gossypium raimondii
Gorai.007G196400
I
0.921
orange1.1g021187m.g
Citrus sinensis
orange1.1g021187m.g
I
0.921
SapurV1A.0487s0230
Salix purpurea
SapurV1A.0487s0230
I
0.921
PDK_20s1306451g001
Phoenix dactylifera
PDK_20s1306451g001
I
0.921
Bo7g011640
Brassica oleracea
Bo7g011640
I
0.920
SELMODRAFT_402243
Selaginella moellendorffii
SELMODRAFT_402243
I
0.920
SELMODRAFT_408624
Selaginella moellendorffii
SELMODRAFT_408624
I
0.920
GLYMA02G05620
Glycine max
GLYMA02G05620
I
0.919
cassava26615.m1
Manihot esculenta
cassava26615.m1
I
0.919
28623.m000400
Ricinus communis
28623.m000400
I
0.918
mgf022574m
Mimulus guttatus
mgf022574m
I
0.918
Thhalv10022756m.g
Eutrema salsugineum
Thhalv10022756m.g
I
0.918
Cucsa.043420
Cucumis sativus
Cucsa.043420
I
0.917
Gorai.008G063600
Gossypium raimondii
Gorai.008G063600
I
0.917
Cla005768
Citrullus lanatus
Cla005768
I
0.915
Lus10028372.g
Linum usitatissimum
Lus10028372.g
I
0.915
Lus10041822.g
Linum usitatissimum
Lus10041822.g
I
0.915
Bo3g093950
Brassica oleracea
Bo3g093950
I
0.914
Bo7g117820
Brassica oleracea
Bo7g117820
I
0.913
Bra017750
Brassica rapa
Bra017750
I
0.913
ANAC076
Arabidopsis lyrata
fgenesh2_kg.7__450__AT4G36160.1
I
0.913
Cagra.4734s0006
Capsella grandiflora
Cagra.4734s0006
I
0.913
Carubv10004997m.g
Capsella rubella
Carubv10004997m.g
I
0.913
NAC037
Arabidopsis thaliana
AT2G18060
D
0.912
LPERR08G00380
Leersia perrieri
LPERR08G00380
N
0.912
OMERI08G00600
Oryza meridionalis
OMERI08G00600
N
0.912
Solyc08g079120.1
Solanum lycopersicum
Solyc08g079120.1
I
0.912
VND1
Arabidopsis lyrata
Al_scaffold_0003_3772
I
0.910
BGIOSGA027807
Oryza indica
BGIOSGA027807
N
0.910
Bo1g005810
Brassica oleracea
Bo1g005810
I
0.910
Bra011667
Brassica rapa
Bra011667
I
0.910
OBART08G00290
Oryza barthii
OBART08G00290
N
0.910
ONIVA08G00280
Oryza nivara
ONIVA08G00280
N
0.910
PGSC0003DMG401003552
Solanum tuberosum
PGSC0003DMG401003552
I
0.910
Solyc02g084350.2
Solanum lycopersicum
Solyc02g084350.2
I
0.910
PK11173.1
Cannabis sativa
PK11173.1
I
0.909
SELMODRAFT_100973
Selaginella moellendorffii
SELMODRAFT_100973
I
0.908
SELMODRAFT_71405
Selaginella moellendorffii
SELMODRAFT_71405
I
0.908
PRUPE_ppa022264mg
Prunus persica
PRUPE_ppa022264mg
I
0.907
Pm026735
Prunus mume
Pm026735
I
0.907
MDP0000136180
Malus domestica
MDP0000136180
I
0.907
MDP0000176447
Malus domestica
MDP0000176447
I
0.907
MDP0000298965
Malus domestica
MDP0000298965
I
0.907
MDP0000299959
Malus domestica
MDP0000299959
I
0.907
SapurV1A.0166s0460
Salix purpurea
SapurV1A.0166s0460
I
0.907
SapurV1A.3982s0010
Salix purpurea
SapurV1A.3982s0010
I
0.907
AMTR_s00011p00251570
Amborella trichopoda
AMTR_s00011p00251570
I
0.905
Bostr.7867s1483
Boechera stricta
Bostr.7867s1483
I
0.905
ANAC076
Arabidopsis thaliana
AT4G36160
D
0.904
SELMODRAFT_89986
Selaginella moellendorffii
SELMODRAFT_89986
I
0.904
SELMODRAFT_93824
Selaginella moellendorffii
SELMODRAFT_93824
I
0.904
Thhalv10025510m.g
Eutrema salsugineum
Thhalv10025510m.g
I
0.904
Cla014492
Citrullus lanatus
Cla014492
I
0.903
Aquca_006_00155
Aquilegia coerulea
Aquca_006_00155
I
0.903
Bostr.18351s0273
Boechera stricta
Bostr.18351s0273
I
0.903
gene14869-v1.0-hybrid
Fragaria vesca
gene14869-v1.0-hybrid
I
0.903
BGIOSGA011539
Oryza indica
BGIOSGA011539
I
0.901
LPERR03G01990
Leersia perrieri
LPERR03G01990
I
0.901
OB03G12100
Oryza brachyantha
OB03G12100
I
0.901
OBART03G02180
Oryza barthii
OBART03G02180
I
0.901
OGLUM03G02130
Oryza glumaepatula
OGLUM03G02130
I
0.901
OLONG_011521
Oryza longistaminata
OLONG_011521
I
0.901
OMERI03G02020
Oryza meridionalis
OMERI03G02020
I
0.901
ONIVA03G01790
Oryza nivara
ONIVA03G01790
I
0.901
OPUNC03G01920
Oryza punctata
OPUNC03G01920
I
0.901
ORGLA03G0019500
Oryza glaberrima
ORGLA03G0019500
I
0.901
ORUFI03G01920
Oryza rufipogon
ORUFI03G01920
I
0.901
PGSC0003DMG400004740
Solanum tuberosum
PGSC0003DMG400004740
I
0.901
Sb01g048730
Sorghum bicolor
Sb01g048730
I
0.901
Si036363m.g
Setaria italica
Si036363m.g
I
0.901
Gorai.003G010700
Gossypium raimondii
Gorai.003G010700
I
0.901
Lus10031142.g
Linum usitatissimum
Lus10031142.g
I
0.901
Lus10031721.g
Linum usitatissimum
Lus10031721.g
I
0.901
Pavir.Ib00161
Panicum virgatum
Pavir.Ib00161
I
0.901
BGIOSGA033343
Oryza indica
BGIOSGA033343
I
0.899
OB10G23740
Oryza brachyantha
OB10G23740
I
0.899
OS10G0532000
Oryza sativa
OS10G0532000
I
0.899
Si039467m.g
Setaria italica
Si039467m.g
I
0.899
gene32254-v1.0-hybrid
Fragaria vesca
gene32254-v1.0-hybrid
I
0.899
F775_20020
Aegilops tauschii
F775_20020
I
0.898
MLOC_56769
Hordeum vulgare
MLOC_56769
I
0.898
Traes_4BL_03B8EA3BF
Triticum aestivum
Traes_4BL_03B8EA3BF
I
0.898
Traes_4DL_54E14ABCB
Triticum aestivum
Traes_4DL_54E14ABCB
I
0.898
Ciclev10024218m.g
Citrus clementina
Ciclev10024218m.g
I
0.898
evm.TU.supercontig_29.118
Carica papaya
evm.TU.supercontig_29.118
I
0.898
orange1.1g020354m.g
Citrus sinensis
orange1.1g020354m.g
I
0.898
Pavir.J32898
Panicum virgatum
Pavir.J32898
I
0.898
GLYMA09G36600
Glycine max
GLYMA09G36600
I
0.897
Pavir.Ia02924
Panicum virgatum
Pavir.Ia02924
I
0.897
Pavir.Ib02477
Panicum virgatum
Pavir.Ib02477
I
0.897
GLYMA06G47680
Glycine max
GLYMA06G47680
I
0.896
MTR_8g076110
Medicago truncatula
MTR_8g076110
N
0.896
OLONG_016152
Oryza longistaminata
OLONG_016152
I
0.895
OMERI10G13220
Oryza meridionalis
OMERI10G13220
I
0.895
Cucsa.302120
Cucumis sativus
Cucsa.302120
I
0.895
gene19898-v1.0-hybrid
Fragaria vesca
gene19898-v1.0-hybrid
I
0.895
PRUPE_ppa025341mg
Prunus persica
PRUPE_ppa025341mg
I
0.894
Solyc03g083880.2
Solanum lycopersicum
Solyc03g083880.2
I
0.894
Ca_13929
Cicer arietinum
Ca_13929
I
0.894
Pm010886
Prunus mume
Pm010886
I
0.894
29725.m000235
Ricinus communis
29725.m000235
I
0.894
PK10271.1
Cannabis sativa
PK10271.1
I
0.894
PK23416.1
Cannabis sativa
PK23416.1
I
0.894
PK28510.1
Cannabis sativa
PK28510.1
I
0.894
Aquca_013_00692
Aquilegia coerulea
Aquca_013_00692
I
0.892
GLYMA08G17140
Glycine max
GLYMA08G17140
I
0.890
MTR_2g062730
Medicago truncatula
MTR_2g062730
I
0.890
TCM_033728
Theobroma cacao
TCM_033728
I
0.890
SMB
Vitis vinifera
VIT_19s0085g01210
I
0.890
cassava32687.m1
Manihot esculenta
cassava32687.m1
I
0.890
Gorai.004G268500
Gossypium raimondii
Gorai.004G268500
I
0.890
Lus10032238.g
Linum usitatissimum
Lus10032238.g
I
0.890
LjSGA_059487.1
Lotus japonicus
LjSGA_059487.1
I
0.890
POPTR_0015s14770
Populus trichocarpa
POPTR_0015s14770
I
0.889
MTR_4g101680
Medicago truncatula
MTR_4g101680
I
0.888
OBART10G16620
Oryza barthii
OBART10G16620
I
0.888
OGLUM10G16690
Oryza glumaepatula
OGLUM10G16690
I
0.888
ONIVA10G18400
Oryza nivara
ONIVA10G18400
I
0.888
ORUFI10G17730
Oryza rufipogon
ORUFI10G17730
I
0.888
PGSC0003DMG400000887
Solanum tuberosum
PGSC0003DMG400000887
I
0.888
POPTR_0001s00220
Populus trichocarpa
POPTR_0001s00220
I
0.888
POPTR_0003s11250
Populus trichocarpa
POPTR_0003s11250
I
0.888
TCM_016035
Theobroma cacao
TCM_016035
I
0.888
VIT_02s0154g00020
Vitis vinifera
VIT_02s0154g00020
I
0.888
28200.m000189
Ricinus communis
28200.m000189
I
0.888
SapurV1A.1275s0070
Salix purpurea
SapurV1A.1275s0070
I
0.888
GRMZM2G155816
Zea mays
GRMZM2G155816
I
0.887
LjSGA_069569.1
Lotus japonicus
LjSGA_069569.1
I
0.887
PGSC0003DMG400009665
Solanum tuberosum
PGSC0003DMG400009665
I
0.886
PRUPE_ppa020139mg
Prunus persica
PRUPE_ppa020139mg
I
0.886
Solyc12g017400.1
Solanum lycopersicum
Solyc12g017400.1
I
0.886
VIT_16s0022g00690
Vitis vinifera
VIT_16s0022g00690
I
0.886
Pm019488
Prunus mume
Pm019488
I
0.886
Pm019490
Prunus mume
Pm019490
I
0.886
30147.m014211
Ricinus communis
30147.m014211
I
0.886
MDP0000501518
Malus domestica
MDP0000501518
I
0.886
MDP0000652584
Malus domestica
MDP0000652584
I
0.886
Ca_08693
Cicer arietinum
Ca_08693
I
0.885
cassava47039.m1
Manihot esculenta
cassava47039.m1
I
0.885
BGIOSGA027804
Oryza indica
BGIOSGA027804
N
0.884
gene21248-v1.0-hybrid
Fragaria vesca
gene21248-v1.0-hybrid
I
0.884
Lus10024601.g
Linum usitatissimum
Lus10024601.g
I
0.884
SapurV1A.0634s0120
Salix purpurea
SapurV1A.0634s0120
I
0.884
TRIUR3_10971
Triticum urartu
TRIUR3_10971
N
0.883
Cucsa.320590
Cucumis sativus
Cucsa.320590
I
0.883
mgf020336m
Mimulus guttatus
mgf020336m
I
0.883
Gorai.008G236400
Gossypium raimondii
Gorai.008G236400
I
0.883
TCM_014939
Theobroma cacao
TCM_014939
I
0.882
Ciclev10006988m.g
Citrus clementina
Ciclev10006988m.g
I
0.882
Eucgr.A02887
Eucalyptus grandis
Eucgr.A02887
I
0.882
Gorai.001G048200
Gossypium raimondii
Gorai.001G048200
I
0.882
MDP0000320566
Malus domestica
MDP0000320566
I
0.882
orange1.1g018596m.g
Citrus sinensis
orange1.1g018596m.g
I
0.882
GLYMA04G13660
Glycine max
GLYMA04G13660
I
0.881
POPTR_0012s14660
Populus trichocarpa
POPTR_0012s14660
I
0.881
cassava46384.m1
Manihot esculenta
cassava46384.m1
I
0.881
GLYMA12G00760
Glycine max
GLYMA12G00760
I
0.880
Lus10004338.g
Linum usitatissimum
Lus10004338.g
I
0.880
PGSC0003DMG400021576
Solanum tuberosum
PGSC0003DMG400021576
I
0.879
Sb01g030760
Sorghum bicolor
Sb01g030760
I
0.879
Solyc06g034340.1
Solanum lycopersicum
Solyc06g034340.1
I
0.879
AMTR_s00017p00119990
Amborella trichopoda
AMTR_s00017p00119990
I
0.878
GLYMA05G04250
Glycine max
GLYMA05G04250
I
0.878
GLYMA17G14700
Glycine max
GLYMA17G14700
I
0.878
SapurV1A.0129s0210
Salix purpurea
SapurV1A.0129s0210
I
0.878
GLYMA11G03340
Glycine max
GLYMA11G03340
I
0.877
MTR_1g096430
Medicago truncatula
MTR_1g096430
I
0.877
Cla006372
Citrullus lanatus
Cla006372
I
0.877
Cucsa.251620
Cucumis sativus
Cucsa.251620
I
0.877
mgf021916m
Mimulus guttatus
mgf021916m
I
0.877
Eucgr.F02615
Eucalyptus grandis
Eucgr.F02615
I
0.877
MTR_5g012080
Medicago truncatula
MTR_5g012080
I
0.876
GRMZM2G025642
Zea mays
GRMZM2G025642
I
0.875
GRMZM2G041746
Zea mays
GRMZM2G041746
I
0.875
GRMZM2G104074
Zea mays
GRMZM2G104074
I
0.875
POPTR_0008s07950
Populus trichocarpa
POPTR_0008s07950
I
0.875
POPTR_0010s18420
Populus trichocarpa
POPTR_0010s18420
I
0.875
Sb10g020860
Sorghum bicolor
Sb10g020860
I
0.875
cassava39971.m1
Manihot esculenta
cassava39971.m1
I
0.875
SapurV1A.0093s0460
Salix purpurea
SapurV1A.0093s0460
I
0.875
SapurV1A.0164s0070
Salix purpurea
SapurV1A.0164s0070
I
0.875
AC212859.3_FG008
Zea mays
AC212859.3_FG008
N
0.874
BRADI5G27467
Brachypodium distachyon
BRADI5G27467
N
0.874
LPERR02G09170
Leersia perrieri
LPERR02G09170
I
0.874
Bostr.22157s0066
Boechera stricta
Bostr.22157s0066
I
0.874
Cagra.1670s0031
Capsella grandiflora
Cagra.1670s0031
I
0.874
Carubv10022351m.g
Capsella rubella
Carubv10022351m.g
I
0.874
BRADI3G09520
Brachypodium distachyon
BRADI3G09520
I
0.873
GLYMA20G31551
Glycine max
GLYMA20G31551
I
0.873
Sb04g009180
Sorghum bicolor
Sb04g009180
I
0.873
Pavir.Aa02770
Panicum virgatum
Pavir.Aa02770
I
0.873
Pavir.Ab01037
Panicum virgatum
Pavir.Ab01037
I
0.873
OB02G19660
Oryza brachyantha
OB02G19660
I
0.872
PRUPE_ppa015786mg
Prunus persica
PRUPE_ppa015786mg
I
0.872
Si017641m.g
Setaria italica
Si017641m.g
I
0.872
Ca_04309
Cicer arietinum
Ca_04309
I
0.872
Pm023559
Prunus mume
Pm023559
I
0.872
Aquca_014_00032
Aquilegia coerulea
Aquca_014_00032
I
0.872
BGIOSGA022108
Oryza indica
BGIOSGA022108
I
0.871
BRADI1G38730
Brachypodium distachyon
BRADI1G38730
I
0.871
VND5
Arabidopsis lyrata
fgenesh2_kg.2__212__AT1G62700.1
I
0.871
GLYMA15G42050
Glycine max
GLYMA15G42050
I
0.871
OB06G10310
Oryza brachyantha
OB06G10310
I
0.871
OBART06G00240
Oryza barthii
OBART06G00240
I
0.871
OGLUM06G00210
Oryza glumaepatula
OGLUM06G00210
I
0.871
OMERI06G00230
Oryza meridionalis
OMERI06G00230
I
0.871
ONIVA06G00260
Oryza nivara
ONIVA06G00260
I
0.871
OPUNC06G00220
Oryza punctata
OPUNC06G00220
I
0.871
ORGLA06G0002300
Oryza glaberrima
ORGLA06G0002300
I
0.871
ORUFI06G00250
Oryza rufipogon
ORUFI06G00250
I
0.871
OS06G0104200
Oryza sativa
OS06G0104200
I
0.871
Ca_02365
Cicer arietinum
Ca_02365
I
0.871
mg017416m
Mimulus guttatus
mg017416m
I
0.870