nhr-42 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003632 T306156_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-42
M00691_2.00		 Caenorhabditis elegans
NNYGTRNYNN
NNRNYACRNN		 PBM
Narasimhan et al.(2015)
pTH9085		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00691_2.00 Nuclear receptor 8 77

DNA Binding Domains

Protein ID Domain From To Sequence
C33G8.6 Nuclear receptor 8 77

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG19061 Caenorhabditis briggsae CBG19061 I 0.987
CRE26966 Caenorhabditis remanei CRE26966 I 0.987
CJA17568 Caenorhabditis japonica CJA17568 I 0.967
CRE09147 Caenorhabditis remanei CRE09147 I 0.910
CBG10499 Caenorhabditis briggsae CBG10499 I 0.866
nhr-237 Caenorhabditis elegans WBGene00021610 I 0.864
CBN06077 Caenorhabditis brenneri CBN06077 I 0.762