CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-36
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00017198
T306336_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-36
M02418_2.00
Caenorhabditis elegans
NNRDMDCRNN
NNYGHKHYNN
PBM
Weirauch et al.(2014)
pTH6508
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.745
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02418_2.00
Nuclear receptor
1
72
EMCRVCGKNSAGKHYSVPACHGCKSFFRRAIIHKTAYPECKYDKMCFSKISRITRPRKCRYCRLQKCYEVGM
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
F07C3.10
Nuclear receptor
34
105
EMCRVCGKNSAGKHYSVPACHGCKSFFRRAIIHKTAYPECKYDKMCFSKISRITRPRKCRYCRLQKCYEVGM
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE19708
Caenorhabditis remanei
CRE19708
I
0.981
CBG19242
Caenorhabditis briggsae
CBG19242
I
0.966
CBN28514
Caenorhabditis brenneri
CBN28514
I
0.961
SSTP_0000433200
Strongyloides stercoralis
SSTP_0000433200
I
0.802
SPAL_0001690000
Strongyloides papillosus
SPAL_0001690000
I
0.786
SVE_0662100
Strongyloides venezuelensis
SVE_0662100
I
0.786
PTRK_0000785300
Parastrongyloides trichosuri
PTRK_0000785300
I
0.772
BXY_0179600
Bursaphelenchus xylophilus
BXY_0179600
I
0.764