CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_000989800
(
Globodera pallida
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
GPLIN_000989800
T308684_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000989800
Nuclear receptor
244
308
KNDEGPSLHFGRFTCRACAAFFRRTVSLKLQYTCKRESNCEVDKAARNMCRACRYQKCLQQGMLT
Links
Other
Nuclear receptor
family TFs
Other
Globodera pallida
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_000628500
Globodera pallida
GPLIN_000628500
N
0.949
GPLIN_000805100
Globodera pallida
GPLIN_000805100
N
0.949
BXY_0973100
Bursaphelenchus xylophilus
BXY_0973100
I
0.859
L596_g24910
Steinernema carpocapsae
L596_g24910
N
0.851
L892_g8146
Steinernema scapterisci
L892_g8146
N
0.841
L889_g16048
Steinernema feltiae
L889_g16048
N
0.840
L898_g9580
Steinernema monticolum
L898_g9580
I
0.814
L893_g3450
Steinernema glaseri
L893_g3450
N
0.812
TCNE_0001892601
Toxocara canis
TCNE_0001892601
N
0.772
ASU_03038
Ascaris suum
ASU_03038
N
0.765