CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf00154-processed-gene-0.1
(
Meloidogyne floridensis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
augustus_masked-nMf.1.1.scaf00154-processed-gene-0.1
T312550_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf00154-processed-gene-0.1-mRNA-1
Paired box
321
411
NNNKVRRKRNVDKGGRPLSMEERAKIIQLFHGGMKVNAISKQLCISHGCVSKIITRFRETGNLMPSSHSECRRRKRQQQQMQVKQQTIKTE
Links
Other
Paired box
family TFs
Other
Meloidogyne floridensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc18251
Meloidogyne incognita
Minc18251
N
0.844
MhA1_Contig221.frz3.gene6
Meloidogyne hapla
MhA1_Contig221.frz3.gene6
N
0.756
GPLIN_001350800
Globodera pallida
GPLIN_001350800
N
0.711