CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MhA1_Contig221.frz3.gene6
(
Meloidogyne hapla
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
MhA1_Contig221.frz3.gene6
T312787_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig221.frz3.gene6
Paired box
191
279
SGRGTNLYGRSYCPGRPLSMEERAKIIQLFHGGMKVNAISKQLCISHGCVSKIITRFRETGNLMPSSHSECRRRKRQQQQIQLKQTIKT
Links
Other
Paired box
family TFs
Other
Meloidogyne hapla
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf29399-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf29399-processed-gene-0.0
N
1.000
Minc18251
Meloidogyne incognita
Minc18251
N
0.911
GPLIN_001350800
Globodera pallida
GPLIN_001350800
N
0.879
BXY_0748700
Bursaphelenchus xylophilus
BXY_0748700
N
0.846
NECAME_16810
Necator americanus
NECAME_16810
N
0.764
CJA36291
Caenorhabditis japonica
CJA36291
N
0.763
augustus_masked-nMf.1.1.scaf00154-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00154-processed-gene-0.1
N
0.756