GI18921 (Drosophila mojavensis)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 FBgn0141660 T313692_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
rib
M03950_2.00 		Drosophila melanogaster
YNKTGCRAWT
AWTYGCAMNR		 SELEX
Nitta et al.(2015)
rib_1 		0.955 0.955
rib
M06439_2.00 		Drosophila melanogaster
YGCRAAAWW
WWTTTYGCR		 B1H
Zhu et al.(2011)
rib_SANGER_5_FBgn0003254 		0.955 0.955
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0168138 Pipsqueak 511 555

Links

Other Pipsqueak family TFs
Other Drosophila mojavensis TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GH23095 Drosophila grimshawi FBgn0130552 I 1.000
GJ19776 Drosophila virilis FBgn0206918 I 1.000
rib Drosophila melanogaster FBgn0003254 D 0.955
GA20197 Drosophila pseudoobscura FBgn0080192 I 0.955
GF11582 Drosophila ananassae FBgn0088622 I 0.955
GG21956 Drosophila erecta FBgn0114134 I 0.955
GL17640 Drosophila persimilis FBgn0155243 I 0.955
GM13162 Drosophila sechellia FBgn0168093 I 0.955
GD11439 Drosophila simulans FBgn0183188 I 0.955
GK20672 Drosophila willistoni FBgn0222668 I 0.955
GE12030 Drosophila yakuba FBgn0229805 I 0.955
LCUP014583 Lucilia cuprina LCUP014583 I 0.864
CpipJ_CPIJ010694 Culex pipiens CpipJ_CPIJ010694 N 0.795
AAEL006690 Aedes aegypti AAEL006690 N 0.795
CPIJ010694 Culex quinquefasciatus CPIJ010694 N 0.795
AMAM015038 Anopheles maculatus AMAM015038 N 0.795
LLOJ001678 Lutzomyia longipalpis LLOJ001678 N 0.795
PPAI009758 Phlebotomus papatasi PPAI009758 N 0.795