CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG159569
(
Lottia gigantea
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
LotgiG159569
T313853_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP159569
Pipsqueak
195
239
SDDDLVSAVGDIRSGKLGTRRASTLYGIPRSTLRNKIFKMEIDDQ
LotgiP159569
Pipsqueak
513
554
LLMEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLLRQ
Links
Other
Pipsqueak
family TFs
Other
Lottia gigantea
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10003664
Crassostrea gigas
CGI_10003664
N
0.871
Ocbimv22001664m.g
Octopus bimaculoides
Ocbimv22001664m.g
N
0.837