CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22001664m.g
(
Octopus bimaculoides
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
Ocbimv22001664m.g
T314482_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22001664m.p
Pipsqueak
109
154
TEEELVNAVFEIRSGKLGTRRAAVLYGIPRSTLRNKIFKMETEQQQ
Ocbimv22001664m.p
Pipsqueak
583
624
LLMEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLLRQ
Links
Other
Pipsqueak
family TFs
Other
Octopus bimaculoides
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10003664
Crassostrea gigas
CGI_10003664
N
0.860
LotgiG159569
Lottia gigantea
LotgiG159569
N
0.837
SMAR000814
Strigamia maritima
SMAR000814
N
0.791
PPAI001250
Phlebotomus papatasi
PPAI001250
N
0.791
GB50048
Apis mellifera
GB50048
N
0.779
RPRC010858
Rhodnius prolixus
RPRC010858
N
0.779
YQE_12847
Dendroctonus ponderosae
YQE_12847
N
0.779
CLEC012958
Cimex lectularius
CLEC012958
N
0.779