CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0001348601
(
Gongylonema pulchrum
)
RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02257 (RFX_DNA_binding)
IPR003150
GPUH_0001348601
T319196_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0001348601-mRNA-1
RFX
262
326
EQLTAKWIRMNCVAEMGSIVPRGELYASYVDDLRHRYGALSGSVQTFTNIIKAVYPNVVLRIQQS
Links
Other
RFX
family TFs
Other
Gongylonema pulchrum
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_06587
Wuchereria bancrofti
WUBG_06587
N
0.748
OFLC_0000602701
Onchocerca flexuosa
OFLC_0000602701
N
0.745
TCLT_0000036201
Thelazia callipaeda
TCLT_0000036201
N
0.736
ANCDUO_13967
Ancylostoma duodenale
ANCDUO_13967
N
0.692
OESDEN_14901
Oesophagostomum dentatum
OESDEN_14901
N
0.691
SVUK_0000285501
Strongylus vulgaris
SVUK_0000285501
N
0.690
SBAD_0000841501
Soboliphyme baturini
SBAD_0000841501
N
0.689
L893_g19714
Steinernema glaseri
L893_g19714
N
0.683
ASIM_0000880101
Anisakis simplex
ASIM_0000880101
N
0.681
EFV52546
Trichinella spiralis
EFV52546
N
0.670
D918_02290
Trichuris suis
D918_02290
I
0.666
TPHA_0B03750
Tetrapisispora phaffii
TPHA_0B03750
I
0.655
CGI_10016120
Crassostrea gigas
CGI_10016120
I
0.650