CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra75932
(
Phytophthora ramorum
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
Phyra75932
T320696_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra75932
RWP-RK
77
125
SITLDMLRPHFEEPLAKVAASFGICVTLLKKICRRHGIARWPHRQITGL
Links
Other
RWP-RK
family TFs
Other
Phytophthora ramorum
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.7634
Phytophthora lateralis
fgenesh_scip_prom.28083.7634
N
1.000
estExt_fgenesh1_kg.C_00378
Phytophthora capsici
estExt_fgenesh1_kg.C_00378
N
1.000
PITG_05742
Phytophthora infestans
PITG_05742
N
0.977
F443_00235
Phytophthora parasitica
F443_00235
N
0.959
Physo132525
Phytophthora sojae
Physo132525
N
0.959
fgenesh_scip_prom.46568.2990
Phytophthora kernoviae
fgenesh_scip_prom.46568.2990
N
0.939
maker-pve_contig_244-fgenesh-gene-0.5
Pythium vexans
maker-pve_contig_244-fgenesh-gene-0.5
N
0.918
HpaG800557
Hyaloperonospora arabidopsidis
HpaG800557
N
0.878
PYU1_G005004
Pythium ultimum
PYU1_G005004
N
0.878
maker-piw_contig_1009-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_1009-fgenesh-gene-0.1
N
0.857
maker-pir_contig_962-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_962-fgenesh-gene-0.0
N
0.837
maker-pag1_scaffold_241-snap-gene-0.8
Pythium aphanidermatum
maker-pag1_scaffold_241-snap-gene-0.8
N
0.818
maker-par_contig_498-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_498-fgenesh-gene-0.0
N
0.816
fgenesh_scip_prom.46568.2994
Phytophthora kernoviae
fgenesh_scip_prom.46568.2994
N
0.796
F443_02170
Phytophthora parasitica
F443_02170
N
0.776
maker-pir_contig_677-snap-gene-0.4
Pythium irregulare
maker-pir_contig_677-snap-gene-0.4
N
0.776
Phyra75938
Phytophthora ramorum
Phyra75938
N
0.776
PITG_05734
Phytophthora infestans
PITG_05734
N
0.776
PYU1_G004965
Pythium ultimum
PYU1_G004965
N
0.776
fgenesh_scip_prom.28083.8513
Phytophthora lateralis
fgenesh_scip_prom.28083.8513
N
0.755
HpaG800546
Hyaloperonospora arabidopsidis
HpaG800546
N
0.755
maker-pve_contig_244-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_244-fgenesh-gene-0.3
N
0.755
snap-piw_contig_1471-abinit-gene-0.10
Pythium iwayamai
snap-piw_contig_1471-abinit-gene-0.10
N
0.755
maker-pag1_scaffold_241-snap-gene-0.5
Pythium aphanidermatum
maker-pag1_scaffold_241-snap-gene-0.5
N
0.735