CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PITG_05742
(
Phytophthora infestans
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
PITG_05742
T320724_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PITG_05742T0
RWP-RK
1
44
MLRPHFEEPLAKVAAHFGICVTLLKKICRRHGIARWPHRQITGL
Links
Other
RWP-RK
family TFs
Other
Phytophthora infestans
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_00235
Phytophthora parasitica
F443_00235
N
1.000
fgenesh_scip_prom.28083.7634
Phytophthora lateralis
fgenesh_scip_prom.28083.7634
N
0.977
HpaG800557
Hyaloperonospora arabidopsidis
HpaG800557
N
0.977
Phyra75932
Phytophthora ramorum
Phyra75932
N
0.977
Physo132525
Phytophthora sojae
Physo132525
N
0.977
estExt_fgenesh1_kg.C_00378
Phytophthora capsici
estExt_fgenesh1_kg.C_00378
N
0.977
PYU1_G005004
Pythium ultimum
PYU1_G005004
N
0.886
maker-pve_contig_244-fgenesh-gene-0.5
Pythium vexans
maker-pve_contig_244-fgenesh-gene-0.5
N
0.878
maker-pir_contig_962-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_962-fgenesh-gene-0.0
N
0.864
maker-piw_contig_1009-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_1009-fgenesh-gene-0.1
N
0.864
fgenesh_scip_prom.46568.2990
Phytophthora kernoviae
fgenesh_scip_prom.46568.2990
N
0.837
maker-pag1_scaffold_241-snap-gene-0.8
Pythium aphanidermatum
maker-pag1_scaffold_241-snap-gene-0.8
N
0.818
maker-par_contig_498-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_498-fgenesh-gene-0.0
N
0.818
fgenesh_scip_prom.46568.2994
Phytophthora kernoviae
fgenesh_scip_prom.46568.2994
N
0.773
F443_02170
Phytophthora parasitica
F443_02170
N
0.750
fgenesh_scip_prom.28083.8513
Phytophthora lateralis
fgenesh_scip_prom.28083.8513
N
0.750
maker-pve_contig_244-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_244-fgenesh-gene-0.3
N
0.750
Phyra75938
Phytophthora ramorum
Phyra75938
N
0.750
PITG_05734
Phytophthora infestans
PITG_05734
N
0.750
snap-piw_contig_1471-abinit-gene-0.10
Pythium iwayamai
snap-piw_contig_1471-abinit-gene-0.10
N
0.750
HpaG800546
Hyaloperonospora arabidopsidis
HpaG800546
N
0.727
SPRG_01851
Saprolegnia parasitica
SPRG_01851
N
0.705
maker-pag1_scaffold_15-snap-gene-0.94
Pythium aphanidermatum
maker-pag1_scaffold_15-snap-gene-0.94
N
0.705
maker-piw_contig_52-fgenesh-gene-0.18
Pythium iwayamai
maker-piw_contig_52-fgenesh-gene-0.18
N
0.705
Phyra72995
Phytophthora ramorum
Phyra72995
N
0.705
Phyra80034
Phytophthora ramorum
Phyra80034
N
0.705
PYU1_G013112
Pythium ultimum
PYU1_G013112
N
0.705