CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
VIT_16s0098g00350
(
Vitis vinifera
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
VIT_16s0098g00350
T322108_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_16s0098g00350.t01
SAND
509
579
VLPNKVTVTCSGVEGIYFPSIHLVVCKCGSCGMEKQSLTEWERHTGSKGKNWKTSVRVKGSMLSLEQWMLQ
Links
Other
SAND
family TFs
Other
Vitis vinifera
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla004317
Citrullus lanatus
Cla004317
N
0.978
Cucsa.032070
Cucumis sativus
Cucsa.032070
N
0.977
PK12172.1
Cannabis sativa
PK12172.1
N
0.970
PGSC0003DMG400009121
Solanum tuberosum
PGSC0003DMG400009121
N
0.955
Solyc03g083410.2
Solanum lycopersicum
Solyc03g083410.2
N
0.955
cassava2176.valid.m1
Manihot esculenta
cassava2176.valid.m1
N
0.941
ATX4
Arabidopsis lyrata
scaffold_701476.1
N
0.929