CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK12172.1
(
Cannabis sativa
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01342 (SAND)
IPR000770
PK12172.1
T322284_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK12172.1
SAND
555
625
VLPNKVTVLCNGVEGTYFPSLHLVVCKCGFCGSEKQALSEWERHTGAKSRNWKMSVRVKGSMLPLEQWMLQ
Links
Other
SAND
family TFs
Other
Cannabis sativa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla004317
Citrullus lanatus
Cla004317
N
0.984
Cucsa.032070
Cucumis sativus
Cucsa.032070
N
0.983
VIT_16s0098g00350
Vitis vinifera
VIT_16s0098g00350
N
0.970
PGSC0003DMG400009121
Solanum tuberosum
PGSC0003DMG400009121
N
0.947
Solyc03g083410.2
Solanum lycopersicum
Solyc03g083410.2
N
0.947
ATX4
Arabidopsis lyrata
scaffold_701476.1
N
0.935
cassava2176.valid.m1
Manihot esculenta
cassava2176.valid.m1
N
0.929