CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla022529
(
Citrullus lanatus
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
Cla022529
T324058_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla022529
Sigma 70
279
349
LLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRG
Links
Other
Sigma 70
family TFs
Other
Citrullus lanatus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.160980
Cucumis sativus
Cucsa.160980
N
0.972
Pm005207
Prunus mume
Pm005207
N
0.744
AMTR_s00056p00209700
Amborella trichopoda
AMTR_s00056p00209700
N
0.704
PK05603.1
Cannabis sativa
PK05603.1
N
0.704