Pm005207 (Prunus mume)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 Pm005207 T324059_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm005207 Sigma 70 6 48

Links

Other Sigma 70 family TFs
Other Prunus mume TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa003696mg Prunus persica PRUPE_ppa003696mg N 1.000
gene09028-v1.0-hybrid Fragaria vesca gene09028-v1.0-hybrid N 0.977
mgf012819m Mimulus guttatus mgf012819m N 0.860
PGSC0003DMG400025465 Solanum tuberosum PGSC0003DMG400025465 N 0.837
Solyc08g065970.2 Solanum lycopersicum Solyc08g065970.2 N 0.837
TCM_037242 Theobroma cacao TCM_037242 N 0.837
29794.m003368 Ricinus communis 29794.m003368 N 0.814
Ciclev10007968m.g Citrus clementina Ciclev10007968m.g N 0.814
orange1.1g009449m.g Citrus sinensis orange1.1g009449m.g N 0.814
SapurV1A.0890s0100 Salix purpurea SapurV1A.0890s0100 N 0.814
Thhalv10010251m.g Eutrema salsugineum Thhalv10010251m.g N 0.814
SIGC Arabidopsis lyrata Al_scaffold_0005_2291 N 0.791
SIGC Arabidopsis thaliana AT3G53920 N 0.791
Bostr.11793s0002 Boechera stricta Bostr.11793s0002 N 0.791
Cagra.2252s0020 Capsella grandiflora Cagra.2252s0020 N 0.791
Carubv10016920m.g Capsella rubella Carubv10016920m.g N 0.791
Gorai.010G103500 Gossypium raimondii Gorai.010G103500 N 0.767
Bra014857 Brassica rapa Bra014857 N 0.744
Cla022529 Citrullus lanatus Cla022529 N 0.744
PDK_20s1533271g001 Phoenix dactylifera PDK_20s1533271g001 N 0.721