SapurV1A.0671s0070 (Salix purpurea)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 SapurV1A.0671s0070 T324243_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0671s0070.1.p Sigma 70 324 362
SapurV1A.0671s0070.2.p Sigma 70 344 373

Links

Other Sigma 70 family TFs
Other Salix purpurea TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA04G00330 Glycine max GLYMA04G00330 N 1.000
Eucgr.D01094 Eucalyptus grandis Eucgr.D01094 N 0.967
GSMUA_Achr7G17330_001 Musa acuminata GSMUA_Achr7G17330_001 N 0.867
MDP0000157652 Malus domestica MDP0000157652 N 0.744
orange1.1g007404m.g Citrus sinensis orange1.1g007404m.g N 0.722
SIGB Arabidopsis thaliana AT1G08540 N 0.718
Bra030732 Brassica rapa Bra030732 N 0.718
SIGB Arabidopsis lyrata fgenesh2_kg.1__869__AT1G08540.1 N 0.718
POPTR_0019s06100 Populus trichocarpa POPTR_0019s06100 N 0.718
PRUPE_ppa006657mg Prunus persica PRUPE_ppa006657mg N 0.718
TCM_025741 Theobroma cacao TCM_025741 N 0.718
Cla007091 Citrullus lanatus Cla007091 N 0.718
Pm025497 Prunus mume Pm025497 N 0.718
30148.m001412 Ricinus communis 30148.m001412 N 0.718
cassava14033.valid.m1 Manihot esculenta cassava14033.valid.m1 N 0.718
Cucsa.362600 Cucumis sativus Cucsa.362600 N 0.718
mgf015824m Mimulus guttatus mgf015824m N 0.718
Bostr.25219s0090 Boechera stricta Bostr.25219s0090 N 0.718
Cagra.4395s0044 Capsella grandiflora Cagra.4395s0044 N 0.718
Carubv10008711m.g Capsella rubella Carubv10008711m.g N 0.718
evm.TU.supercontig_73.29 Carica papaya evm.TU.supercontig_73.29 N 0.718
gene17946-v1.0-hybrid Fragaria vesca gene17946-v1.0-hybrid N 0.718
Gorai.007G347300 Gossypium raimondii Gorai.007G347300 N 0.718
SapurV1A.1189s0050 Salix purpurea SapurV1A.1189s0050 N 0.718
SapurV1A.1953s0020 Salix purpurea SapurV1A.1953s0020 N 0.718
Thhalv10007187m.g Eutrema salsugineum Thhalv10007187m.g N 0.718
PK16345.1 Cannabis sativa PK16345.1 N 0.718
chr1.CM0017.250.nc Lotus japonicus chr1.CM0017.250.nc N 0.718