CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ANCDUO_08685
(
Ancylostoma duodenale
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
ANCDUO_08685
T325585_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sma-4
M02484_2.00
Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN
PBM
Weirauch et al.(2014)
pTH8996
0.776
0.776
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ANCDUO_08685
SMAD
100
149
VRKAIESLVKKLKEKRVELDALITAVTSAGKQPTTCVTIQHTVLQYRYHI
Links
Other
SMAD
family TFs
Other
Ancylostoma duodenale
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI01928500
Haemonchus contortus
HCOI01928500
I
0.837
HCOI02014300
Haemonchus contortus
HCOI02014300
I
0.837
TELCIR_06960
Teladorsagia circumcincta
TELCIR_06960
I
0.837
Bm5359
Brugia malayi
Bm5359
I
0.755
BTMF_0000952301
Brugia timori
BTMF_0000952301
I
0.755
L893_g15056
Steinernema glaseri
L893_g15056
I
0.755
TCLT_0000412001
Thelazia callipaeda
TCLT_0000412001
I
0.735
PTRK_0001020700
Parastrongyloides trichosuri
PTRK_0001020700
I
0.714
RSKR_0000114900
Rhabditophanes kr3021
RSKR_0000114900
I
0.714