CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RO3G_14196
(
Rhizopus oryzae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
RO3G_14196
T326115_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_14195
Sox
105
173
PKGPGNVFFLYCRMERDKIKDECQTENLGEVTRILGQKWKSLTKEEKQKYQDLYKRELEDHEEAMKAYT
Links
Other
Sox
family TFs
Other
Rhizopus oryzae
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RO3G_15546
Rhizopus oryzae
RO3G_15546
N
0.589
RO3G_16621
Rhizopus oryzae
RO3G_16621
N
0.589
gw1.8.568.1
Mucor circinelloides
gw1.8.568.1
N
0.589
fgeneshMC_pg.4_#_602
Mucor circinelloides
fgeneshMC_pg.4_#_602
N
0.579
fgeneshPB_pg.53__64
Phycomyces blakesleeanus
fgeneshPB_pg.53__64
N
0.576
estExt_fgeneshPB_pg.C_220136
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_220136
N
0.502
RO3G_03341
Rhizopus oryzae
RO3G_03341
N
0.489
e_gw1.39.66.1
Phycomyces blakesleeanus
e_gw1.39.66.1
N
0.478