CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RO3G_15546
(
Rhizopus oryzae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
RO3G_15546
T326118_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_15545
Sox
55
123
PKGPGNVFFLYCRMERDNIKDEVPNESLGEVTRLLGQKWKALTKEEKQKYYDIYKKEMEEYESAMKSYT
Links
Other
Sox
family TFs
Other
Rhizopus oryzae
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RO3G_16621
Rhizopus oryzae
RO3G_16621
N
0.741
gw1.8.568.1
Mucor circinelloides
gw1.8.568.1
N
0.733
estExt_fgeneshPB_pg.C_220136
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_220136
N
0.601
fgeneshMC_pg.4_#_602
Mucor circinelloides
fgeneshMC_pg.4_#_602
N
0.601
RO3G_14196
Rhizopus oryzae
RO3G_14196
N
0.589
fgeneshPB_pg.53__64
Phycomyces blakesleeanus
fgeneshPB_pg.53__64
N
0.585
RO3G_03341
Rhizopus oryzae
RO3G_03341
N
0.511
estExt_fgeneshMC_kg.C_50140
Mucor circinelloides
estExt_fgeneshMC_kg.C_50140
N
0.493
e_gw1.39.66.1
Phycomyces blakesleeanus
e_gw1.39.66.1
N
0.444
gw1.1.828.1
Phycomyces blakesleeanus
gw1.1.828.1
N
0.425