CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNOG_11541
(
Stagonospora nodorum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SNOG_11541
T326129_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_11541
Sox
145
220
PKKPLTAAFLYAQTARPIVRADLEAALEPGAILEKNAVNLEVTKRWNELPDEEKERWKASYRSSMEDYKIELAEYL
Links
Other
Sox
family TFs
Other
Stagonospora nodorum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SNOG_11541
Phaeosphaeria nodorum
SNOG_11541
N
0.682
PTRG_04765
Pyrenophora triticirepentis
PTRG_04765
N
0.488
PTT_17830
Pyrenophora teres
PTT_17830
N
0.488
COCC4DRAFT_206881
Bipolaris maydis
COCC4DRAFT_206881
N
0.463
COCCADRAFT_39005
Bipolaris zeicola
COCCADRAFT_39005
N
0.463
COCMIDRAFT_5045
Bipolaris oryzae
COCMIDRAFT_5045
N
0.463
COCSADRAFT_175386
Bipolaris sorokiniana
COCSADRAFT_175386
N
0.463
COCVIDRAFT_18451
Bipolaris victoriae
COCVIDRAFT_18451
N
0.463
SETTUDRAFT_162014
Setosphaeria turcica
SETTUDRAFT_162014
N
0.463
estExt_fgenesh1_pg.C_280025
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_280025
N
0.463
AB03388.1
Alternaria brassicicola
AB03388.1
N
0.454