CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCSADRAFT_175386
(
Bipolaris sorokiniana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
COCSADRAFT_175386
T327147_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMD59523
Sox
123
198
PKKPLTAAFLYHQHARPIVKADLEAALPPGGQIEKNAVQLEVNKRWNELPEEEKEQWKASYRNSMEEYKAELAEYI
Links
Other
Sox
family TFs
Other
Bipolaris sorokiniana
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_206881
Bipolaris maydis
COCC4DRAFT_206881
N
0.741
COCCADRAFT_39005
Bipolaris zeicola
COCCADRAFT_39005
N
0.741
COCMIDRAFT_5045
Bipolaris oryzae
COCMIDRAFT_5045
N
0.741
COCVIDRAFT_18451
Bipolaris victoriae
COCVIDRAFT_18451
N
0.741
estExt_fgenesh1_pg.C_280025
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_280025
N
0.741
SETTUDRAFT_162014
Setosphaeria turcica
SETTUDRAFT_162014
N
0.708
AB03388.1
Alternaria brassicicola
AB03388.1
N
0.691
PTRG_04765
Pyrenophora triticirepentis
PTRG_04765
N
0.653
PTT_17830
Pyrenophora teres
PTT_17830
N
0.653
LEMA_P089660.1
Leptosphaeria maculans
LEMA_P089660.1
N
0.575
SNOG_11541
Stagonospora nodorum
SNOG_11541
N
0.463
SNOG_11541
Phaeosphaeria nodorum
SNOG_11541
N
0.444