CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPPG_03502
(
Spizellomyces punctatus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SPPG_03502
T326139_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPPG_03502T0
Sox
607
675
PKKNVSAFLLFCKDKRPEVMDENPGLSITEASKKLGELWKSITPDEKKKYDNLASEDKERYERERKVYE
Links
Other
Sox
family TFs
Other
Spizellomyces punctatus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.32.10.1
Bigelowiella natans
gw1.32.10.1
N
0.481
Aqu1.209664
Amphimedon queenslandica
Aqu1.209664
N
0.444
GSPATT00032282001
Paramecium tetraurelia
GSPATT00032282001
N
0.442
Thaps2728
Thalassiosira pseudonana
Thaps2728
N
0.427
D918_09264
Trichuris suis
D918_09264
N
0.423
TMUE_s0009009400
Trichuris muris
TMUE_s0009009400
N
0.423
TTRE_0000108401
Trichuris trichiura
TTRE_0000108401
N
0.423
estExt_fgenesh1_pm.C_130068
Coccomyxa subellipsoidea C169
estExt_fgenesh1_pm.C_130068
I
0.416
estExt_Genewise1.C_130158
Chlorella vulgaris
estExt_Genewise1.C_130158
I
0.416