CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CBG18244
(
Caenorhabditis briggsae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CBG18244
T326873_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG18244
Sox
944
1002
ATTAAVLYANEKHAYLKQQFPVWAERVKQIQKLWRNLSSEERQDYVNRARDNRTKSGAK
Links
Other
Sox
family TFs
Other
Caenorhabditis briggsae
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE04664
Caenorhabditis remanei
CRE04664
N
0.575
CBN03428
Caenorhabditis brenneri
CBN03428
N
0.508
CJA05625
Caenorhabditis japonica
CJA05625
N
0.445