CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA05625
(
Caenorhabditis japonica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CJA05625
T327065_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA05625
Sox
940
996
QATTAAVLYANERHGYLKAQYPEWQDRVKQIQKLWRTLGSEERQDYVNRARDNRTSR
Links
Other
Sox
family TFs
Other
Caenorhabditis japonica
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000570501
Angiostrongylus cantonensis
ACAC_0000570501
N
0.581
CRE04664
Caenorhabditis remanei
CRE04664
N
0.519
CBN03428
Caenorhabditis brenneri
CBN03428
N
0.463
DME_0001058101
Dracunculus medinensis
DME_0001058101
N
0.449
CBG18244
Caenorhabditis briggsae
CBG18244
N
0.445
EVEC_0000369701
Enterobius vermicularis
EVEC_0000369701
N
0.426