CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CHLREDRAFT_192899
(
Chlamydomonas reinhardtii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CHLREDRAFT_192899
T327058_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDP00331
Sox
22
90
PKKPMGAYMWFCKEMREQVKADNPEFSVTDIGRRLGELWKECEDDDKKKFQDLADKDKERYNKENAAYQ
Links
Other
Sox
family TFs
Other
Chlamydomonas reinhardtii
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_Genewise1.C_690028
Volvox carteri
estExt_Genewise1.C_690028
N
0.639
HelroG160584
Helobdella robusta
HelroG160584
N
0.458
HelroG177154
Helobdella robusta
HelroG177154
N
0.449
MVLG_07162
Microbotryum violaceum
MVLG_07162
I
0.440
L889_g3706
Steinernema feltiae
L889_g3706
N
0.440
SPPG_05251
Spizellomyces punctatus
SPPG_05251
I
0.438
TPHA_0A03740
Tetrapisispora phaffii
TPHA_0A03740
I
0.429
CBU85550.1
Babesia bovis
CBU85550.1
I
0.427
CBF82108.1
Babesia bovis
CBF82108.1
I
0.427
CBU86735.1
Babesia bovis
CBU86735.1
I
0.427
CBV00234.1
Babesia bovis
CBV00234.1
I
0.427
CBF61859.1
Babesia bovis
CBF61859.1
I
0.427
EDO05788.1
Babesia bovis
EDO05788.1
I
0.427
CBU86344.1
Babesia bovis
CBU86344.1
I
0.427
AAA27799.1
Babesia bovis
AAA27799.1
I
0.427
CBF61316.1
Babesia bovis
CBF61316.1
I
0.427
CBF60306.1
Babesia bovis
CBF60306.1
I
0.427
TA04735
Theileria annulata
TA04735
I
0.426
CAOG_07557
Capsaspora owczarzaki
CAOG_07557
N
0.422
TP03_0469
Theileria parva
TP03_0469
I
0.422
DEHA2D17710g
Debaryomyces hansenii
DEHA2D17710g
I
0.419
O9G_002262
Rozella allomycis
O9G_002262
I
0.419
AOL_s00076g81
Arthrobotrys oligospora
AOL_s00076g81
I
0.417
PFL0145c
Plasmodium falciparum
PFL0145c
I
0.417
gw1.32.10.1
Bigelowiella natans
gw1.32.10.1
N
0.415