CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG177154
(
Helobdella robusta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
HelroG177154
T330543_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP177154
Sox
272
340
PKKPLTPYMRFSKLIWQKVKLSNPGMTVCEVGTAIGQMWREMSDGDKQTYNADFAVDKARYDDELQNYL
Links
Other
Sox
family TFs
Other
Helobdella robusta
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HelroG160584
Helobdella robusta
HelroG160584
N
0.487
HelroG178410
Helobdella robusta
HelroG178410
N
0.465
estExt_Genewise1.C_690028
Volvox carteri
estExt_Genewise1.C_690028
N
0.456
CHLREDRAFT_192899
Chlamydomonas reinhardtii
CHLREDRAFT_192899
N
0.449
CapteG111479
Capitella teleta
CapteG111479
N
0.446
L889_g3706
Steinernema feltiae
L889_g3706
N
0.433
CHLREDRAFT_142283
Chlamydomonas reinhardtii
CHLREDRAFT_142283
N
0.426
TsM_000047400
Taenia solium
TsM_000047400
N
0.425
ECANG7_05376
Echinococcus canadensis
ECANG7_05376
N
0.425
TASK_0000875901
Taenia asiatica
TASK_0000875901
N
0.425
EmuJ_000113200
Echinococcus multilocularis
EmuJ_000113200
N
0.425
CLEC001104
Cimex lectularius
CLEC001104
N
0.417
HDID_0000207001
Hymenolepis diminuta
HDID_0000207001
N
0.417
MCOS_0000928101
Mesocestoides corti
MCOS_0000928101
N
0.417