CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG87165
(
Helobdella robusta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
HelroG87165
T330570_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP87165
Sox
39
108
PKRPTSAYFYFVQLEREEAAKRGERINRVADWTKQVSAKWRTLTNEQKEQFQVLAAGDKVRYSQQMAVYT
HelroP87165
Sox
115
181
PKRPQSAYFLWLADFRVRVKDKFAEHKDILRAAGEEWRKMTMDDKAPYEQLAEEERKKYDIKIKEYN
Links
Other
Sox
family TFs
Other
Helobdella robusta
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HelroG82979
Helobdella robusta
HelroG82979
N
0.591
Ocbimv22013621m.g
Octopus bimaculoides
Ocbimv22013621m.g
N
0.467
Ocbimv22030504m.g
Octopus bimaculoides
Ocbimv22030504m.g
N
0.464
CapteG56147
Capitella teleta
CapteG56147
N
0.457
LotgiG134831
Lottia gigantea
LotgiG134831
N
0.444