CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG134831
(
Lottia gigantea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
LotgiG134831
T330937_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP134831
Sox
18
87
PKKPTSSYFYFLEECRRKAKEEGRSLSKIAEFTRECSATWKDITATEKKKFEDKAAADKKRYQKEMESYV
LotgiP134831
Sox
109
175
PKRPQSAYFLFLADFRKKMKGKDIENRELLKQAGVEWGKLSKDQKKPFEKLSEVEKGKYDAAMAIYN
Links
Other
Sox
family TFs
Other
Lottia gigantea
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22030504m.g
Octopus bimaculoides
Ocbimv22030504m.g
N
0.452
HelroG87165
Helobdella robusta
HelroG87165
N
0.444
Ocbimv22013621m.g
Octopus bimaculoides
Ocbimv22013621m.g
N
0.442
BGLB010807
Biomphalaria glabrata
BGLB010807
N
0.440
HelroG82979
Helobdella robusta
HelroG82979
N
0.417