maker-pve_contig_1-fgenesh-gene-1.21 (Pythium vexans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 maker-pve_contig_1-fgenesh-gene-1.21 T331162_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPV00000013144 Sox 445 513
EPrPV00000013144 Sox 534 602

Links

Other Sox family TFs
Other Pythium vexans TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-pir_contig_78-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_78-fgenesh-gene-0.0 N 0.489
PYU1_G009481 Pythium ultimum PYU1_G009481 N 0.487
maker-pve_contig_1-fgenesh-gene-1.10 Pythium vexans maker-pve_contig_1-fgenesh-gene-1.10 N 0.477
ALNC14_025770 Albugo laibachii ALNC14_025770 N 0.473
maker-par_contig_8731-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_8731-fgenesh-gene-0.0 N 0.467
fgenesh_scip_prom.28083.225 Phytophthora lateralis fgenesh_scip_prom.28083.225 N 0.465
maker-pag1_scaffold_208-fgenesh-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_208-fgenesh-gene-0.7 N 0.465
Phyra73033 Phytophthora ramorum Phyra73033 N 0.465
F443_05401 Phytophthora parasitica F443_05401 N 0.464
estExt_fgenesh1_kg.C_12090001 Phytophthora capsici estExt_fgenesh1_kg.C_12090001 N 0.464
PITG_16117 Phytophthora infestans PITG_16117 N 0.454
fgenesh_scip_prom.46568.1753 Phytophthora kernoviae fgenesh_scip_prom.46568.1753 N 0.450