CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PYU1_G009481
(
Pythium ultimum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PYU1_G009481
T332332_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PYU1_T009499
Sox
34
102
PKRALSAFMFFSNDIRDTVKREMPELEFLQISSEIGRRWKEISEEDRRPYDELAAADKKRYLEEKEDYV
PYU1_T009499
Sox
122
190
PKRALSAYFFFCNEIRDSVRSQNPNMKITEIATLLAAKWRELPEKKRVKYQKMHEEAKVKYQSAMDDYN
Links
Other
Sox
family TFs
Other
Pythium ultimum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-pir_contig_78-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_78-fgenesh-gene-0.0
N
0.733
ALNC14_025770
Albugo laibachii
ALNC14_025770
N
0.721
fgenesh_scip_prom.28083.225
Phytophthora lateralis
fgenesh_scip_prom.28083.225
N
0.710
Phyra73033
Phytophthora ramorum
Phyra73033
N
0.710
PITG_16117
Phytophthora infestans
PITG_16117
N
0.699
F443_05401
Phytophthora parasitica
F443_05401
N
0.690
fgenesh_scip_prom.46568.1753
Phytophthora kernoviae
fgenesh_scip_prom.46568.1753
N
0.690
estExt_fgenesh1_kg.C_12090001
Phytophthora capsici
estExt_fgenesh1_kg.C_12090001
N
0.690
maker-pve_contig_1-fgenesh-gene-1.10
Pythium vexans
maker-pve_contig_1-fgenesh-gene-1.10
N
0.688
maker-pag1_scaffold_208-fgenesh-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_208-fgenesh-gene-0.7
N
0.685
maker-par_contig_8731-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_8731-fgenesh-gene-0.0
N
0.675
SPRG_05304
Saprolegnia parasitica
SPRG_05304
N
0.554
estExt_fgenesh1_kg.C_40116
Phytophthora capsici
estExt_fgenesh1_kg.C_40116
N
0.537
maker-pve_contig_1-fgenesh-gene-1.21
Pythium vexans
maker-pve_contig_1-fgenesh-gene-1.21
N
0.487
HpaG806488
Hyaloperonospora arabidopsidis
HpaG806488
N
0.483