CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PFL1_04035
(
Pseudozyma flocculosa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PFL1_04035
T331835_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPQ28207
Sox
337
407
PKQAPSAWQIFFTEELQKIKAHSPGEKLNVAHVAKDAGQRYAALPQSAKQEFQRRSLEAKEVWEKEMEDWK
EPQ28207
Sox
442
514
PKKPLSAYFLFLRAIRADPNMTQEVFEGESETTKQSVLAAAKWRSLSETEKQPYLDKAEQDKARYEHLRRDYE
Links
Other
Sox
family TFs
Other
Pseudozyma flocculosa
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PSEUBRA_SCAF3g03552
Pseudozyma brasiliensis
PSEUBRA_SCAF3g03552
N
0.643
PHSY_004430
Pseudozyma hubeiensis
PHSY_004430
N
0.643
sr12460
Sporisorium reilianum
sr12460
N
0.643
UHOR_02084
Ustilago hordei
UHOR_02084
N
0.643
UM01390
Ustilago maydis
UM01390
N
0.643
PaG_03069
Pseudozyma aphidis
PaG_03069
N
0.643
PAN0_007d3117
Pseudozyma antarctica
PAN0_007d3117
N
0.643
K437DRAFT_223452
Tilletiaria anomala
K437DRAFT_223452
N
0.625
BOTBODRAFT_37556
Botryobasidium botryosum
BOTBODRAFT_37556
N
0.520
CNA04270
Cryptococcus neoformans
CNA04270
N
0.513
L804_02037
Cryptococcus gattii
L804_02037
N
0.513
V565_038130
Rhizoctonia solani
V565_038130
N
0.490
M408DRAFT_74753
Serendipita vermifera
M408DRAFT_74753
N
0.481
PIIN_05647
Piriformospora indica
PIIN_05647
N
0.481
M408DRAFT_308571
Serendipita vermifera
M408DRAFT_308571
N
0.470